Cynara cardunculus var. scolymus (artichoke): 112505739
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Entry
112505739 CDS
T05604
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112505739
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112505739
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
112505739
NCBI-ProteinID:
XP_024965456
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Position
LG 2:complement(8683100..8688780)
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AA seq
216 aa
AA seq
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MASTIPSDNGTLAQTLKPDTQSETTAITAVKTDSKPEAEAALETRTEPADKNPSATDSAT
AEATASPEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGDIIRKMCEDTKARIRVLDAPVGT
PDRIVLISGKEETEAPLSPAMDAVIRVFKRVNGFPENDSESIASVPFCSIRLLVPSMQAI
SLIGKQGSSIKSIQESTGCSVRVLSGSMNLLVINET
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacgataccctcagacaatggcaccctcgcacaaaccctaaaacccgacaca
caatctgagactactgccataactgctgtaaaaaccgactcgaagccggaggcggaagcg
gcgctggagactaggacggagccagcagataaaaatccttcagctactgactcagctacg
gcagaggcaacggcgtctccggaaaagaagtggcctgggtggccaggtgactgcgttttt
cggctcatagtgccggtgcttaaggttggtagtataattggacggaaaggcgatatcatt
aggaagatgtgcgaagacacgaaagctcgtatccgtgtactcgacgcccctgttggtacc
cctgaccgcattgtcttaatatctggcaaagaagaaacagaggcacctctctcacctgca
atggatgctgtaattagggtattcaaacgtgtcaatggctttccggagaatgatagtgag
agcatagcatccgttccattttgctcaatccgattgttggtgccatcaatgcaagcgata
agtctgattggaaagcaaggatcttcaatcaagtcgatacaggagagcactggttgttct
gtgcgagtgctctcaggtagtatgaatttgctggtcataaatgaaacctga
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