KEGG   Cynara cardunculus var. scolymus (artichoke): 112505746
Entry
112505746         CDS       T05604                                 
Name
(RefSeq) ABC transporter C family member 10
  KO
K05666  ATP-binding cassette, subfamily C (CFTR/MRP), member 2
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010  ABC transporters
ccav04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    112505746
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    112505746
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ccav02000]
    112505746
Transporters [BR:ccav02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    112505746
SSDB
Motif
Pfam: ABCC10_N ABC_tran ABC_membrane AAA_21 SMC_N AAA_29 MMR_HSR1 AAA_22 NB-ARC AAA_23 DO-GTPase2 AAA_16 DUF87 NTPase_1 MeaB Mg_chelatase MobB AAA_30
Other DBs
NCBI-GeneID: 112505746
NCBI-ProteinID: XP_024965509
LinkDB
Position
LG 1:379896..387036
AA seq 1463 aa
MADLWSSFCGCSDGSDKNCDSDLVFITNPSSCMNHILIICFDLLLLGMLLLNLFYKSPLK
PGNRKSRLQLVSAVFNGLLGTLYSCVGFWTLKTTISTTHTVLPLHEWLLFLFHGLTWLAV
SLTVSLWGKNFAKTPVQLMSIVAFLFAGIFGILSFIYSILNKRVSIKIALDALSFLGATL
LLSCTYKGYKYEETDEKGLYTPLNGETKGIKEGYDDNLTPLAKAGFLNVMSFWWLNPLMK
LGSEKTLQEKDMPKLCIEDRAESCYLTFLDQLNKQKHLHSSSQPSTLRTIVMCNLKELLI
SGFFALMKIITVSAGPLFLKSFIRVAEGNDSFSGEGYVLALGLFFSKILESLSQRQWDFR
CRLIGIRVRSLLTAAIYKKQLNLSNAAKITHSAGEIMNYATVDAYRIGELPNWIHQSWTT
ILQLIFALAILFQAVGLATFASLGVIIFTVICNAPLAKLQHQFQSKLMIAQDERLKAISE
ALVNMKVLKLYAWEIHFKGVIEKLRTVEDKWLSAVQLRRAYNSFLFWSSPLLVSTATFGA
CYFIGIPLNASNVFTFVATLRLVQDPIRTIPDVIGFIIQAKVAFSRILNFLEAPELESAH
VRQKVNKAGLDYNILIESASLSWEENLVKPTLRKINLRARLGEKIAICGEVGSGKSTLLA
GILGEVPIIEGTLQVYGSIAYVSQSAWIQTGSIRDNILFGSAMDEQRYQETIEKCSLVKD
LELLMYGDLTEIGERGVNLSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTASSLFNE
FVMEALSRKTVLLVTHQVDFLPAFDSVLLMSDGEILAAAPYHQLMGSSREFQDLVNAHKE
TAGSERLAEVSSSTKWITSIKDVTNARTNKTSGASGDDQLIKKEEMEEGDTGLRPYIQYL
SQNKGYLFFSIAALSHVIFVACNVCQNSWMAANVDNPEITTLKLIVVYLAIGVTAMVFLL
SRSLFTVALGLQSSKSIFSQLLISLFRAPMSFYDSTPLGRVLSRVSVDLSIIDLDIPFNL
IFALAATTNFYSNMGVLVFVTWQILFVSIPLVYVALRLQRYYFSSAKMLMRINGTTKSLV
ANHLAESVAGAMTIRAFKQEDRFFLKNLDVVDINASPYLHSFAANNWLIQRLETISATVL
SASGLCMVLLPPGTFSSGFIGMAMSYGLSLNMSLVMSIQNQCTLVNYIISVERVNQYMHL
PSEAPIVIEKNRPPTNWPNVGKVDIQDLQIRYRPDTPLVLRGVTCTFQGGHKIGIVGRTG
SGKTTLISALFRLVEPIGGKIVVDGIDISTVGLHDLRSRFGIIPQDPTLFNGTVRYNLDP
LCQHTDQEIWEVLGKCQLKEAVQDKTGGLDSIVVEDGTNWSMGQRQLFCLGRALLRRSKI
LVLDEATASIDNATDTMLQETIRSEFADCTVITVAHRIPTVMDCTMVLTMSDGKIAEYDD
PMKLMRSDDSLFGQLVKEYWSHS
NT seq 4392 nt   +upstreamnt  +downstreamnt
atggctgatctatggagttcgttttgtgggtgttcagatggcagtgacaagaattgtgat
tcagatttggtttttatcacaaatccttcttcgtgcatgaatcatattttgatcatttgt
ttcgatttattgctcctcggaatgttacttctcaacctgttttacaagtcaccattgaaa
cccggtaataggaaatcacgtttgcagttagtttctgcagtctttaatggtttactgggt
actttgtactcatgtgtgggcttttggacattgaagaccacaataagcacaacccacact
gttcttcctttgcatgaatggctactattcttgtttcatggactaacatggttagcagtc
tcactaactgtgagtctctggggaaagaatttcgcaaaaaccccggttcagcttatgtca
atagttgcttttctatttgctgggatctttggcatcttatcttttatatattccattctc
aacaaaagggtgtcaatcaagatagctttggatgcattgtctttcctaggagcaacattg
ctattatcatgcacttataagggctacaaatatgaagaaacggatgaaaaaggtctttat
acccccttgaatggcgagactaaaggcatcaaagaaggttatgatgacaatcttacccca
cttgccaaagctgggtttctcaatgtaatgtcgttttggtggttgaatccattgatgaaa
ctgggtagtgagaaaaccctccaagaaaaagatatgcccaagttgtgcattgaagataga
gcggaatcgtgttatttgacttttttggaccaattaaataagcaaaaacatttgcattcg
tcgtctcagccatcgactctaaggacaatagtgatgtgcaatttgaaagagcttctaata
tctggattctttgcattgatgaaaataattacagtttctgccggccctctttttcttaag
tctttcatcagggttgccgaaggtaatgatagttttagcggcgaaggttatgtgttagct
ttaggacttttcttttctaagatcttggagtccttatcacaaaggcaatgggactttagg
tgtagacttattggcataagagttagatccttgcttacagcagccatatataagaaacaa
ttgaacttatctaatgctgccaagattacacattcggctggtgagattatgaactatgcc
actgtggatgcttatagaataggggagcttcctaattggatccatcagagttggacaacc
attctccagcttatcttcgctctagctattcttttccaagctgtaggtttggctacattt
gcatctttgggggtcataatatttacggtcatttgcaacgccccacttgctaaattacag
catcagttccaatctaagctaatgattgcacaagatgagaggcttaaagcaatctcagag
gctcttgtgaatatgaaggtgttaaaactttatgcatgggaaattcattttaagggtgtg
attgaaaagttgaggacagtggaagataagtggttgtcagctgttcagcttcgtagagct
tataatagctttcttttctggtcgtctcctcttttggtctcaactgctacttttggggcc
tgctactttattgggattcctttgaatgctagcaacgttttcacatttgtagcaacttta
cgtctggttcaagaccctattagaactatccctgatgttatcgggtttatcattcaagca
aaagtggctttttccagaatcttgaattttcttgaggcacctgagctggagagtgctcat
gtgaggcagaaggtgaacaaggccggtctggattataacatcttgattgagtctgcgagt
ctttcatgggaagagaacctagtgaagcctactctacgaaagataaacttacgggccaga
ttgggcgaaaagattgctatttgtggagaggttggctcaggcaagtcaacccttttagca
ggaattcttggagaggttccaataatcgagggaactcttcaagtatatgggagcattgcg
tatgtttctcagtcagcttggattcaaacgggtagtattcgggataatattttgtttgga
tctgctatggatgaacagagataccaagaaacaatagagaagtgttctttggtgaaggat
cttgagctgctaatgtatggtgatctcaccgagataggagagagaggagttaatctcagc
ggtggacagaagcaaaggattcaactcgctcgtgctttatatcaggatgctgatatctat
ctcttggatgatcctttcagtgccgtggatgcacacactgcttcgagcttatttaatgaa
tttgttatggaagctctttccaggaagaccgttttgcttgtaactcaccaagtcgatttc
cttcctgcatttgactctgttctattgatgtcagatggggaaatcctagctgcggctcct
tatcatcaactgatgggatcgagccgagaattccaggatttggtgaatgcacacaaagaa
actgcaggttctgaaaggcttgcagaggttagctcttccacaaagtggataacatcaatc
aaagacgttacgaatgctcgtacaaacaaaacatctggagcatccggggacgatcaattg
atcaagaaagaagagatggaagaaggggacactggtttgagaccttacatacaatatcta
agtcaaaataaaggctaccttttcttctccatagctgcactctcgcacgttatcttcgtg
gcatgtaatgtatgtcagaactcatggatggctgcaaatgtcgacaaccctgaaatcacc
actctgaaattgatagtcgtttacttagctattggggttacggcaatggtgtttctgctc
agtagatcactcttcacagttgcattgggcttgcagtcttcaaaatccattttttcccag
ctacttatctctctttttcgggcaccaatgtcgttttatgattctacccctttgggtagg
gtactgagcagggtctcggttgatttgagtattattgatcttgatattccgttcaatctt
atatttgctcttgctgccaccacaaatttctattctaatatgggggtgctagtctttgtt
acctggcaaatcttgtttgtctcgatacctctagtttatgtggcacttcgtttgcagaga
tactacttctcctctgcgaaaatgcttatgcggatcaatgggacaacaaaatctttggtg
gcaaaccatcttgcagaatctgtggcaggagccatgacaataagagcatttaaacaagaa
gatcgtttctttttgaaaaatcttgatgttgttgacataaatgctagtccttatttgcac
agttttgctgctaacaattggttgattcaacggttagaaacaatcagcgcaaccgttcta
tcagcttcaggactctgcatggtgttgcttcctcctggaacttttagttctggtttcatt
ggaatggcgatgtcttatgggctttccttaaacatgtcccttgttatgtcgatccaaaac
cagtgcacgttggtaaactatatcatttcagtcgaaagggtcaatcagtacatgcattta
ccaagtgaagctccaatagtgatcgaaaagaatcgcccccctactaattggccgaatgtt
ggtaaagttgatattcaagatttgcagattaggtaccgacccgatacacctcttgttctt
cgtggggtcacttgtacatttcaaggcggacacaagattggtattgttgggaggactggt
agcggcaaaactactctcattagtgctttatttcgtctggtggaacccattggggggaaa
attgttgtcgatgggatagatatttctactgttggacttcatgatttaaggtcacgattc
gggattatacctcaagatcctacacttttcaatggaacagttagatataatttggatccc
ttatgtcaacatacagatcaagaaatatgggaggttcttggaaagtgtcagcttaaagag
gcggttcaggataaaacaggcggcctggattcgatagtggtcgaagatggaacaaattgg
agcatggggcaacgacagttgttctgcttggggcgtgcgttgttaagacgtagcaagatt
ttggtgctggatgaagcaactgcatccatcgacaatgctacagacacaatgttacaagaa
actatcagatctgagtttgctgattgcaccgtcatcacagtggctcaccggataccaacc
gtgatggattgtaccatggtcctaaccatgagcgatggaaaaatagcggaatatgatgac
ccgatgaagctgatgagaagtgatgattcgttgtttggacagcttgtgaaggaatactgg
tcccattcttaa

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