Cynara cardunculus var. scolymus (artichoke): 112505771
Help
Entry
112505771 CDS
T05604
Name
(RefSeq) auxin response factor 1 isoform X1
KO
K14486
auxin response factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112505771
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARF_AD
B3
AUX_IAA
BRWD_AD
DNA_pol_lambd_f
RSA-1_N
Motif
Other DBs
NCBI-GeneID:
112505771
NCBI-ProteinID:
XP_024965512
LinkDB
All DBs
Position
LG_2
Genome browser
AA seq
673 aa
AA seq
DB search
MGHIAGTHYPGGPQSGSLGDAIYKELWHACAGPLVNVPREGERVYYFPQGHMEQLEASMH
QGLDQQLPSFDLPAKILCKVVNIQLRAEPETDEVYAQITLLPDPDQNEVTIPDPPPTEPP
SCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNEWHFR
HIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGENGELRVGVRRLMRLLNNMPSSVI
SSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSLNKYLEARNHKLLVGMRFKMR
FEGEEVPERRFSGTIVGVGDTASSKWLDSEWRSLKVQWDELSSILRPDRVSPWELEPLVA
SNSTNSPPLQRNKRARSVLPNSVPDISGLGMWKSPGDRPSAFQYCDPQRGRDIYPSNNIS
SITGISLSYSENGSLPPASTTSMHWSNLREAITESFEPLASKESGEKRQSNGYRLFGIEL
LEHPNVDETSPMVVSRTVAEERPLCPVDTESDWGSEPSNVNRSDIPSASCEPEKCSMRSQ
EFHTRQIRSCTKVHMQGIAVGRAVDLTQLNCYEDLLRKLENMFEIEGELHVVPKKWQVVY
TDCEDDIMMVGDDPWHEFCSMVRKIFIYTTEEAKRLSPKIKLPENDELIQGKLVLNAQVS
TEEQSSSNEGFGC
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggacatattgctggaactcattaccctggagggcctcagtcaggatccttgggtgat
gccatatacaaagaattgtggcatgcctgtgctggacccctggtcaatgtcccccgtgaa
ggagaacgggtttattacttccctcaaggacacatggaacagcttgaggcctccatgcat
cagggtttagaccagcagctcccatcatttgacttaccagccaaaatactgtgcaaagtg
gtgaatattcagcttcgagctgaaccagaaactgatgaagtttatgcacagataactctg
ttacctgacccagatcaaaatgaggtaacaatcccagatcctccacccacagaacctcct
agttgcactgttcactcgttctgcaagacacttactgcgtccgacacaagcacacatggt
ggattctctgttcttcgtaggcatgcggatgactgtttgcctccacttgatatgtctcaa
cagccaccctggcaagaactggttgctagtgatcttcatggcaatgaatggcattttcgt
catatatttcgagggcaacctcggcgtcacttgctgactactgggtggagtgtctttgtt
agtgcaaaaaagttggttgctggcgatgcttttatcttcctaaggggggaaaatggagag
ctacgtgttggagtaaggaggcttatgaggcttttaaataatatgccatcatctgtgata
tcaagtcatagcatgcatctgggcgttcttgctacagcttcgcatgcaattgcaactgga
acccttttttcagttttttataagccaagaactagtcgatctgagttcattgtcagcctt
aacaagtatcttgaagctcgaaatcacaagcttttggttggaatgaggtttaagatgaga
tttgagggtgaagaggttcctgaaagaaggtttagtgggaccatagttggtgttggggat
acagcatcatcgaaatggctggactctgaatggagatctttaaaggttcaatgggatgaa
ctgtcatcgatactacgcccggatagagtttcaccctgggaactagaaccacttgttgca
tccaattcaacaaactcaccacctctacagaggaataagagggcccgatctgttttaccc
aattctgtgccagatatttctggacttgggatgtggaaatcacctggtgaccgtccctcg
gctttccagtattgtgatccccaacgtggacgtgatatatacccatcaaataatatctct
tctatcacgggtatctctctgagctacagtgagaatggttctttgcctcctgcttccacc
acttctatgcattggtctaacttaagggaagcgataacagaatcatttgaacctcttgct
agtaaagaaagtggtgaaaagagacaaagtaatggctacaggctatttggaatcgagtta
cttgaacacccaaatgttgatgaaacttcaccaatggttgtgtcgagaacagtggccgag
gaacgaccgctctgccctgttgatacagaatctgattgggggtctgaaccatcaaatgtc
aaccgttctgatattccttcagcaagttgtgagcctgaaaagtgcagcatgagatctcag
gagttccataccaggcaaattcgtagctgcacgaaagttcatatgcaagggattgctgtt
ggtagggctgtcgatttaacgcagttgaattgttacgaggatttactgcggaagctggaa
aatatgtttgaaattgaaggtgaacttcatgtggtaccaaagaaatggcaggttgtatac
actgattgcgaggatgacattatgatggtcggtgatgatccttggcatgagttctgcagc
atggtgcgaaagatcttcatatacaccacggaagaagccaagaggctttccccaaagatc
aaacttccggaaaatgatgaattaatacaagggaagctggttttaaatgctcaggttagc
actgaagagcagtcctcatcaaacgagggttttggttgctga
DBGET
integrated database retrieval system
