Cynara cardunculus var. scolymus (artichoke): 112505773
Help
Entry
112505773 CDS
T05604
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112505773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112505773
Enzymes [BR:
ccav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112505773
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
112505773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
112505773
NCBI-ProteinID:
XP_024965517
LinkDB
All DBs
Position
LG 2:complement(22624014..22642155)
Genome browser
AA seq
1190 aa
AA seq
DB search
MPMKAEAQARVSGRHRLTPHLPCDPDYEPLRELFSHHIHSFDHLVEYGLEKALMNIKPVE
VVDPNTKLKLRIWFEKPELYPPQKERGTFREALSPYECRQAKISYTGKFLVDVCFKYGDG
PGGAVIREKINFGQFPIMLKSKLCHLRDADHQKLVACKEEPSEMGGYFILNGLERVVRLL
NVPKRNYPTSMARSAFRNRREGFTDKAVVIRCVREDQSAVTLNLYYLSNGSARVGFRIRG
RENLLPIGLVLKALIDATDHEIFMSLISVYNDKYEKAKGSVGTQILSERAKIILNEVRDL
SLFTRIQCLHYIGEYFKPFMDGMENESHSAVADAVLREFILVHLDNNHDKFNLLIFMVQK
LFSFIDQTSVPDNPDSLQTQEVLLPGHLITIYVKEKLQEWLLKTKRQLQEETKNRKKNFE
FGSLADVKKALDKNPAKQVGLSVENMLKTGRLVTQSTLDLKEKAGMTVQAERLNFLRFVS
HFRAVHRGSSLAGLRTTSVRKLLPESWGFICPVHTPDGSPCGLLNHMTASCRITSYYDSE
GIIRDFSKIQKSILSVLVGAGMIPALPKLVKAGPPEVLHVLLDGRVVGAIPTDRVEKAVS
HLRKLKLSATSAIPEDLEVGYVPISMGGAFPGLYLFTSPSRFVRPVRQKFLPPEGNNNIE
LIGPFEQVYMEIECADGGNGGRLNEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQ
CQMAKQTMGFSSQGINCRADQKLYHLQTPQTPIVRTATYEKYRIDDSPLGTNAIVAVLAY
SGYDMEDAMVLNKSSVDRGFAHGYIYQTESIDFADEKIKSDRGQRVFRRNYTKTETHSFI
DSDGLPYIGQMIKPGEPYYSTYNEVTSKASDARLKGSEPAIVDYVAVDVKNKKQLQKANI
RLRRGRKPVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAM
LLESIAAKGGSLHGNFVNATPFSSSVKKPDGTPENESDSLVDELGSLLTARGFNHYGVEV
LYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKKGGGIRFG
EMERDSLLAHGAAYLLHDRLHSSSDHHIADICSICGSILTTTLIERQKKTMRETKGLPPA
REPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIRMTLQLSNGAGA
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgaaagcagaagcacaagcaagggtttcagggaggcatagattgacgccacac
ctaccgtgcgatcccgactatgagcccttaagggagctcttcagccatcatattcattca
ttcgatcacttggtcgagtatggtttagagaaggcactcatgaacataaagcccgtcgag
gtcgtcgatcctaacaccaagttgaagctaagaatctggtttgaaaaacctgagctatat
ccaccgcaaaaggagcgtggaacatttcgtgaagctctctctccgtatgagtgtagacag
gctaaaatttcatatactggtaaatttttggtggatgtctgcttcaaatatggcgatggt
cctggtggagctgttataagagaaaaaatcaattttgggcagtttcctattatgttgaag
tctaaactttgtcacctcagagatgctgatcatcaaaagctggtggcttgtaaagaagaa
ccatcagaaatgggtgggtacttcatattaaacgggcttgagagggttgtccgattatta
aatgtgccaaagagaaactatccaactagcatggccagaagtgcatttcgcaatcgacga
gaaggatttaccgataaagctgtggtgataagatgtgttagagaagatcaatcggctgta
accctcaatttatattaccttagcaatgggagtgcaagggttggatttcggatacgaggg
agggagaatttgttacctataggacttgttttgaaggcacttattgatgctactgatcat
gaaattttcatgagtttgatatccgtgtacaatgataaatatgagaaagcaaaaggttct
gttggcactcagattttgagtgaaagggcaaaaatcattcttaatgaagttagagatctg
tctctttttactcgcattcagtgcctgcattacattggagagtactttaaacctttcatg
gatggcatggaaaacgaaagtcactctgctgttgctgatgccgttttaagagaattcata
ttggtccatcttgataacaatcatgataaatttaatctgctgatcttcatggtgcagaag
cttttttcttttattgatcaaacctctgtaccagacaaccctgattcattgcaaactcag
gaagttctgctgccaggtcacttgattacaatatatgttaaggaaaaattgcaggaatgg
ctgctaaaaactaaaagacagcttcaagaggaaactaaaaatagaaagaaaaactttgag
ttcggcagcttagctgatgtgaagaaggcactggataaaaatcctgcaaaacaggttggt
ctatctgttgaaaatatgctaaagactggaagattggttacacagtcgactcttgatctg
aaagagaaagctggtatgacggttcaggcagagaggctcaattttctacgttttgtgtca
cattttagagctgttcatagaggttcatcacttgcagggctccgcaccacaagtgtgcgt
aagttgttgccagaatcctggggattcatatgccctgttcacacgccagatgggtctcca
tgtggactgctaaaccatatgacagcttcatgtcgtatcacctcatattatgattcagaa
gggataattagagatttctcaaaaatacagaagtctattctgagtgttctggttggggct
ggtatgatccctgcattaccaaaacttgtaaaagctggtcctccagaagttcttcatgtt
ttacttgatggccgtgttgttggtgctatacccactgatagagtggagaaagctgtcagc
cacttacgaaaattaaagctatcagcgacttcagcgatccctgaagatctggaggtggga
tatgtacctattagcatggggggagcattccctggtctgtacctgttcacaagtccttca
cgatttgttcgaccagttagacagaaatttctacctcctgaaggaaacaacaatattgaa
ttgattgggccatttgaacaggtttatatggaaatagagtgtgcggatggaggaaatggt
ggaaggttaaatgagtttcctgccactcatgaagaaattcatccaacaggaatacttagc
gttgttggtaatcttaccccatggtctgatcataatcagagtccaagaaatatgtaccag
tgtcagatggcaaaacagacaatgggcttctcttcacaagggatcaattgtcgcgcagat
caaaagctgtatcaccttcagactcctcaaaccccaatcgtccgtactgctacatatgaa
aaatacaggatcgatgactctccattagggacaaatgccattgttgcagttctggcttat
tcaggatatgatatggaagatgccatggtgttaaacaagtcatctgttgatcgtggtttt
gctcatgggtacatttaccagactgagtctattgattttgctgatgagaagatcaaatct
gatcgtggtcagagagtatttagaagaaactatacaaaaacggaaacacattcattcatc
gattcagatgggctcccgtatattgggcagatgataaaaccaggcgagccatattatagc
acgtataatgaagtgacgagtaaggcatccgatgcaaggttgaagggctcggagcctgct
atagttgattatgttgcagtggatgtgaaaaacaaaaagcagttacaaaaggcaaacata
cgtttacgtcgtggcagaaagcctgtaattggtgacaagtttagcagtagacatgggcag
aaaggtgtatgctctcaactctggccagatgttgatatgccgttttcagcagttaccgga
atgcgaccagatcttattatcaatccgcatgcttttccttcaagaatgacaattgctatg
cttttagaatcaattgctgcaaagggaggttctttgcatgggaattttgtgaatgcaaca
cctttctctagctcggttaagaaaccggatggaaccccagaaaatgaaagtgattcactt
gttgatgaacttggttctttgttaactgctcgtgggtttaatcactacggtgtggaagtt
ttatacagtggagtctacggaacggaattaacatgtgagatcttcattggtccggtttat
tatcaaagacttcggcatatggtttctgacaaatttcaggttagatcaacgggaacagta
gatcaagttacacgacagcctataaaaggaagaaagaagggaggcggtattcgttttggg
gagatggaacgtgactcccttcttgcacacggggctgcatatttattgcatgataggctt
cactcgagttcagatcatcacatagccgatatctgctccatttgtggaagcattctcacg
acgacactaattgaacgtcagaaaaaaacaatgagggagaccaaaggtttaccccctgca
agggaacccaaaaaagttacgtgcgtttcttgccaaacaagcaaaggtatggaaaccgtc
gctatgccatacgtttttaggtatttggctgcggaattagcggccatgaacatacgaatg
acactccaactaagtaatggagcaggtgcttga
DBGET
integrated database retrieval system
