Cynara cardunculus var. scolymus (artichoke): 112505817
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Entry
112505817 CDS
T05604
Name
(RefSeq) putative multidrug resistance protein isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112505817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112505817
04147 Exosome [BR:
ccav04147
]
112505817
04090 CD molecules [BR:
ccav04090
]
112505817
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112505817
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112505817
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112505817
CD molecules [BR:
ccav04090
]
Proteins
112505817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_21
ABC_ATPase
DUF87
AAA_22
RsgA_GTPase
AAA_16
AAA_15
nSTAND1
Motif
Other DBs
NCBI-GeneID:
112505817
NCBI-ProteinID:
XP_024965597
LinkDB
All DBs
Position
LG 2:complement(69080898..69086053)
Genome browser
AA seq
1253 aa
AA seq
DB search
MGGNKNGIFRYADGLDKFLMFWGTLGSIGDGLQVPLMMYVLSGVINQYGDPKAIVTCSTV
DKYSLRLLYVAIAVGLSAFVEGLCWSRTAERQTSRMRLHYLKSVLKQDVAFFDTQQPAAS
STTYQVVSTITADSNAIQVTIGEKIPDTLAYLSSSFFCHIFAFTLSWRLTLAALPFSIMF
LVPALGFGKLMMDVGMLMIASYATAGTIAEQAISSIRTVYSYVGEHQTIINFGNALQTTM
ELGIKQGFARGLMLGSMGIIYVSWAFQAWVGSLLVTKHDEKGGDVFVAGFNVLMGGLNIL
TALPNLTAIAESKGAATRINEMIDRNPTINSEDKKGKALSYVRGKIEFKGIYFSYPSRPD
SPILQGLNLMIPAGKTVGLVGGSGSGKSTTMSLILRFYDPIEGEILLDGHKINKLHLRWL
RSQMGLVNQEPILFATSIKENILFGKEGASFDDVVAAAKDANAHDFIVKLPDGYETNVGQ
FGIQLSGGQKQRVAIARALIRDPKILLLDEATSALDTESERVVQKAIDQASVGRTTIVIA
HRMSTVRRADMIYVIQAGKVVESGSHAELMQMNGRKDGGGEYLKMVQLQQSAPGNEVMDI
SNSFQSPYRMSVAASPTSVRSSAPSTPSLNPFSPAFSITTPYSVQFNTSYDSDEEDNLRK
LSHSAPSQFRLLKMNAPEWVATLWGCLGAIGSGAVQPINAYCVGGVIHVYFESDKSSIVD
HARTYSFVFLALGVFNFISSVIQHYSFAVMGEKLTTRVRKKLLENLLTFEIGWYDEDENT
SAAICARLSSEANMVRSLVGDRLSLLTQAFFGAVFAYTLGLVLSWRLALVLMAAQPFLIG
SFYARSVLMKSLSEKSHKAQKEGSQLASEAVINHRTITAFSSQRRVVSLFKDTLEGPKKE
SIRQSYYSGVGLFSSQFMATASTALAYWYGGRLLTQGLIAPEKLFQAFLVLLFTAYTIAD
AGSMTKDISRGSNAVSSVFAILDKKSEINPDTSHGHDSIKGNIRGRVELRNVLFAYPSRP
DHMVFKGLNLKIKQGTSVALVGPSGSGKSTIIGLIERFYDPLKGVICIDERDIKEYNLRA
LRSHIGLVSQEPTLFAGTIRENIAYGKPSAKESEIRNAAMLANAHEFISGMKDGYETYCG
ERGVQLSGGQKQRIALSRAILKNPAILLLDEATSALDTISESLVQEALEKMMKGRTCIVV
AHRLSTIQNSVSIAVIQDGKVAEQGSHSDLLSLHGGAYSNLVKMQGGNSPFRH
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaaataagaatggaatattcaggtatgcagatgggttggataagtttttgatg
ttttggggaacgttgggaagcatcggagacggattgcaagtccccttgatgatgtacgtt
cttagcggtgtcatcaaccaatacggagatccaaaagccattgttacttgttcaactgtc
gacaagtattcgctcaggttgctttatgttgcaattgcagttgggttatctgcctttgtt
gaaggactttgttggtcaagaactgcagaaagacaaacttcccgaatgagactccactac
ctcaaatcggtccttaaacaagatgtcgccttcttcgacacccaacaacctgctgcttcc
tctaccacttaccaagttgtatcaaccatcaccgccgattccaacgccattcaagtcacc
atcggcgagaagataccagatactctcgcctacttgtcatcctccttcttctgccacatt
ttcgcatttacgctatcttggaggcttaccttggctgccctcccattctccataatgttc
cttgtacctgccctcggattcggcaagctcatgatggatgtaggaatgcttatgattgca
tcctatgctactgctggtactattgcagaacaagccatttcctccataagaaccgtctat
tcctacgttggtgagcatcaaaccatcattaacttcggcaacgcacttcaaaccaccatg
gaactaggaataaagcaaggctttgctagaggacttatgttgggaagcatggggatcatc
tacgttagctgggcgttccaagcttgggttggatctcttctcgtcactaaacatgatgaa
aagggtggtgatgttttcgttgctggatttaatgtgctcatgggaggattgaacatattg
actgcactcccaaatctcacggccattgcggagtcaaaaggtgctgctactcgaatcaat
gagatgatcgacagaaatccaactatcaactctgaagataagaaaggaaaggctctatca
tatgtaagagggaaaatcgagttcaaaggaatctactttagctacccttcgaggcctgat
tcccctattctacaagggttgaatctcatgataccggctggtaagactgttggtcttgtt
ggaggtagcggttcgggcaagtcaacaactatgtcacttattctaaggttttatgatcca
atagagggtgagattttgttggatggacacaagataaataaacttcatctcagatggctg
agatcccaaatgggtctggtgaatcaagagccaattctgtttgcaacttctatcaaagag
aacatactgtttgggaaggaaggagcatcttttgatgatgttgtagcagcagccaaggat
gcaaatgcacatgacttcattgttaagttgccagatgggtatgaaaccaatgttgggcaa
tttggaattcaactatccggagggcaaaagcagcgagttgcaattgctcgtgcactaatt
agagatcctaaaatcttgctcctcgatgaagcaacaagtgcacttgacacagagtctgaa
cgagtcgtgcagaaagccattgaccaggcctctgttgggagaacgactattgtaattgca
caccgcatgtcaacagttaggagggccgatatgatatatgtgattcaggcagggaaagta
gtcgaatcaggctcacatgctgagctgatgcaaatgaatggcagaaaggatggtggtggt
gagtacttaaaaatggtgcagttgcaacaatcagctccaggaaatgaagtcatggacata
tctaatagtttccaaagcccctacagaatgtcagttgcagccagtccaacaagtgtgaga
tcgagtgcacctagcaccccatcgctgaatccattcagcccagcgttctccattactaca
ccctattccgttcaattcaacacctcttatgatagtgatgaagaagataatttaaggaaa
ctatctcattcagctccttctcaatttcgtttgttgaagatgaatgcacccgagtgggta
gcaaccctctggggatgcttaggagccataggctccggtgctgttcaacccatcaacgca
tactgtgtaggcggtgttatccatgtttattttgaatccgacaaatcctccattgtagat
catgcaagaacctactctttcgtgttcttagctcttggtgttttcaacttcatctccagt
gtcatccaacattacagcttcgcagtgatgggcgagaagctgaccacgagagtacgaaag
aaactgcttgagaacctcttgacttttgagattggttggtatgatgaagatgagaacaca
agtgcagccatttgtgcacgtttatcatcagaagctaacatggttcgctcacttgtagga
gaccgtttgtcattactaactcaagcatttttcggggccgtctttgcttacacgttagga
ctagtactctcatggaggctggcacttgtgttgatggctgcacaaccattcctcattgga
agtttctacgctagaagcgtcttaatgaagagcttgtcagaaaaatctcacaaggctcaa
aaggaaggaagccaactagcaagtgaagctgtgatcaaccatagaacaataaccgccttc
tcttctcaaagaagggtggttagtctcttcaaggacacattagaaggccctaagaaggaa
agtatcagacaatcatattattctggggtagggctttttagctctcagtttatggcgaca
gcttcaactgcgttggcatattggtatggaggtcgactattaacacaaggattaatagct
ccagagaagctttttcaagcatttctcgtgttgctgttcacagcatataccatagctgat
gcagggagtatgactaaagatatatcaagaggaagcaatgccgttagttcagtctttgca
attctcgacaagaaaagtgagatcaatccagatacttcacacggacatgattccataaaa
gggaacataaggggccgtgtggagctgagaaatgtgttatttgcttatccgtctagacca
gatcatatggtgttcaaaggactgaacctcaagataaagcaaggaacttcggtggcactt
gtggggccaagtggatctggtaaatctaccatcattgggttgatagagaggttctatgac
ccattgaagggtgtgatctgtattgacgaacgagacataaaggagtataacttaagagca
ttgaggtcgcatataggtttagtgagtcaagagccaactctttttgcaggtaccatccgt
gaaaacattgcttacgggaaaccaagtgctaaagaatctgagattaggaatgctgcaatg
cttgccaatgctcatgaatttataagtggaatgaaagatgggtatgaaacatattgtgga
gaaaggggtgtgcagctatcgggaggccagaaacaaagaatagcattgtctcgagcaatt
ctcaagaaccctgctattctactgttggatgaggcaaccagtgctcttgataccatatca
gaaagcttagttcaagaagcactggagaagatgatgaagggacggacatgtattgtggtg
gctcaccgtctctccacaatacaaaactctgtatccattgctgtaattcaagatgggaag
gtggcagagcaagggtctcattctgatcttctatctctgcatggtggagcatattcgaat
cttgtgaaaatgcagggtggcaactcacctttccgacattaa
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integrated database retrieval system
