KEGG   Cynara cardunculus var. scolymus (artichoke): 112505838
Entry
112505838         CDS       T05604                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144  Endocytosis
ccav04145  Phagosome
ccav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112505838
   04145 Phagosome
    112505838
   04148 Efferocytosis
    112505838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112505838
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112505838
   04031 GTP-binding proteins [BR:ccav04031]
    112505838
Membrane trafficking [BR:ccav04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    112505838
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112505838
  Exosomal proteins of other body fluids (saliva and urine)
   112505838
  Exosomal proteins of colorectal cancer cells
   112505838
  Exosomal proteins of bladder cancer cells
   112505838
GTP-binding proteins [BR:ccav04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    112505838
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase ATP_bind_1 nSTAND3 AAA_16 Septin AAA_7 AAA_24 cobW PduV-EutP NTPase_1 AAA_22 ATPase_2 MCM NACHT SRPRB AAA_14 AAA_5 ATP-synt_ab
Other DBs
NCBI-GeneID: 112505838
NCBI-ProteinID: XP_024965639
LinkDB
Position
LG 2:complement(64472404..64481782)
AA seq 206 aa
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVQKSFDSLNNWREEFLIQASPSDPENFPF
VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGIDVEEAFQVISKNALTIG
DEEEIYVPDTIDVGSNSQQRASGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgccttcaagaagaagaacgctgctgaaggtcatcattcttggcgacagcggggtcggt
aagacatctttgatgaaccaatatgtgaacaagaagtttagcaatcaatataaggcaaca
ataggagctgatttcttgacaaaggaagtgcaatttgaggacaggctcttcactctgcag
atctgggatacagcaggacaggaaagatttcagagccttggtgttgctttctaccgcgga
gcagattgttgtgtcctagtgtacgacgtgaatgttcagaaatcctttgatagtctcaac
aattggagggaggaattcctcatccaggcaagtccttcagatccagaaaattttccgttt
gtggttctgggtaacaaggttgatgtagacggtggcaacagcagagtggtatctgagaaa
aaagccagggcttggtgtgcctcaaaaggcaacataccatattttgagacctctgcaaag
gagggaatcgatgttgaagaagcttttcaagttatttcaaagaatgccttgactattgga
gatgaggaagaaatatatgtgccggacaccattgatgtagggagcaacagccaacagagg
gcctccggatgcgaatgctaa

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