Cynara cardunculus var. scolymus (artichoke): 112505886
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Entry
112505886 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112505886
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112505886
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112505886
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112505886
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112505886
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112505886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
112505886
NCBI-ProteinID:
XP_024965719
LinkDB
All DBs
Position
LG_1
Genome browser
AA seq
1135 aa
AA seq
DB search
MTMVTPQPLDQEDEEMLVPHTELLEGPQPVQGPIALDGTPPIEAPQPMEVVGQAEVASTA
ENQAVEEQPQASRFTWVIENFSRQTNKKLYSDVFVVGAYKWRVLIFPKGNNVDHLSMYLD
VADSSSLPYGWSRYAQFSLAVVNQIHNKFTIKKDTQHQFHARESDWGFTSFMALSDLYDP
GRGFLMNDTCIIEADVAVRKVTDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYF
RKAVYHMPTTENDMPSGSIPLALQSLFYKLQYNETSVATKELTKSFGWDTYDSFMQHDVQ
ELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGC
RDVYASFDKYVEVERLEGDNKYHAEEYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFTRDT
MVKINDRYEFPLELDLDRENGKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPT
LSDQWFKFDDERVTKEDMKRALEEQYGGEEELPQTNPGYNNAPFKFTKYSNAYMLVYIRE
SDKEKIICDVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDADLSEQIGK
DIFFDLVDHDKVHSFRIQKQMPFNLFKDEVAKEFGVPVQFQRFWIWAKRQNHTYRPNRPL
TLQEETQSVGQLREVSNKNHNAELKLFLEIEIGPDLRPLPPPDKTKEDILLFFKLYDPEK
EELRYVGRFFVKSAGKPTEIISRLNETAGFSPDEEIELYEEIKFEPCVMCERLDKRTSFR
SSQIEDGDIICFQKLPQAQAEEKYRYPDVPSFLEYVKNRQIVHFRSLDRPKEDDFRLELS
KLHTYDDVVERVARQLELDDPSKIRLTPHNCYSQQPKPHPIKYRVAEHLLDMLVHYNQVS
DILYYEVLDIPLPELQCLKTLKVAFHHATKEEPVVHNIRLPKQSTVGDVLNEIKTKVELS
HPNAELRLLEVFYHKIYKIFPLTEKIENINDQYWTLRAEEIPEEEKNLGPQDRLIHVYHF
TKEAALNQMQVQNFGEPFFLIIRENETLEDVKVRIQRKLEVPDDEFSKWKFAFLSLGRPE
YLQDSDVVSSRFQRRDVYGAWEQYLGLEHSDTTPKRPFTANQNRHTYEKPVKIYN
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgactatggtcactccacaaccattagatcaagaagatgaggagatgcttgtgcctcac
acggagctactggaagggcctcaaccggttcaaggtccaattgctttagatggtactccg
ccaattgaagcccctcaacccatggaagttgtgggtcaagcagaagttgctagcacggca
gagaatcaagcagttgaggagcaacctcaggcgtccaggtttacatgggttattgagaat
ttctctcgtcaaaccaacaagaagctatattctgatgtctttgtggttggtgcatataaa
tggcgtgttcttatatttcccaagggaaacaatgtggaccatttgtccatgtacttagac
gtagctgattcctcatccttgccatatggttggagtagatatgcacaattcagtttggct
gttgttaatcaaattcacaacaagttcaccataaagaaagacacacaacaccagttccat
gcaagggagagtgattgggggttcacatctttcatggctcttagtgatttgtacgacccc
ggtagaggttttcttatgaatgatacatgcattattgaagctgatgttgctgtacgaaaa
gtgactgactattggacatatgactcaaagaaggagaccggttatgttggtcttaagaac
caaggagccacatgttacatgaactctctcctccaaaccttgtaccatatcccttacttt
agaaaggctgtctaccatatgccgacaacagaaaatgatatgccgtctgggagtattcct
ctggctcttcagagcttattctataagcttcaatacaatgaaaccagtgtcgcaacaaaa
gaactaacaaaatcttttggatgggacacatatgattctttcatgcagcatgatgtccaa
gaacttaatcgggtcttgtgtgagaaacttgaagacaagatgaagggaacagttgtggaa
gggacaatacagaagttattcgaaggacatcatatgaattacattgaatgcataaacgtg
gactttaaatcgacaagaaaagaatcattctatgatcttcaacttgatgtgaaaggctgt
cgggatgtttatgcttcttttgacaaatatgttgaagtggaacggcttgagggtgataat
aaataccatgctgaagagtatggtttacaggatgctaagaagggtgtcttgtttattgat
ttcccacctgttcttcaacttcaactaaagcgttttgaatacgattttacaagggataca
atggtaaagataaacgaccgttatgaatttccactggagcttgatcttgacagagagaat
ggcaaatatctatctcctgatgccgacaagagtgtgcggaatctttatacccttcacagt
gtattggttcatagtggaggtgtgcatggaggacactactacgcgtttatcaggccaact
ctgtcggatcagtggttcaagtttgatgatgaaagagttacaaaagaagatatgaagagg
gcattagaagagcagtatggtggtgaggaagagctacctcagacaaatcctggctacaat
aatgctccattcaaatttacaaaatactcaaacgcctacatgcttgtctacatacgtgaa
agcgacaaagaaaagataatttgtgatgttgatgagaaagacattgcagaacatcttagg
ataaggttgaagaaagaacaagaagagaaggaagataagagaagatataaggctcaggct
catctctacacgattatcaaggttgctcgtgatgcagatctgtcagaacagatagggaag
gatatattttttgatcttgttgaccatgacaaagttcatagctttcgtatacagaagcaa
atgccatttaaccttttcaaggatgaggttgccaaagaatttggtgtgcctgttcaattt
cagcggttctggatatgggcaaagaggcagaaccatacataccgtcccaatcgcccatta
acgctgcaggaggaaacacaatcggttgggcaattgagggaggtttccaataagaatcac
aatgctgaactgaaattgttcttggagatagagattggaccggatttgcgacctcttcca
ccccctgacaaaacgaaagaagacatacttcttttcttcaagctttatgatcccgagaag
gaagaactcaggtatgttggtaggttttttgtgaagagtgccggtaaaccgactgaaatt
atatcaaggttaaacgagacagctgggtttagtccagatgaagaaattgaactttatgag
gaaataaaatttgagccatgtgtaatgtgtgaacggcttgacaagagaacttcatttaga
tctagccagattgaagatggagacattatttgctttcagaaactccctcaggctcaggct
gaggagaaataccgatatcctgatgttccttcatttctggaatatgtgaaaaatcgtcag
atagttcattttcgatctctggatagacctaaggaggatgatttccgtctcgaattgtca
aagttgcatacatatgatgatgtggtggagagagtagctcggcaacttgagctagatgat
ccgtcaaaaatcaggcttactccccacaactgctattctcaacaacccaagccgcatccc
atcaagtatcgggttgcagaacatttgctagacatgctagttcactacaatcaggtttca
gatattctgtattatgaagtgttagacatccctctgcctgaactacaatgtctgaaaact
ttaaaggttgcttttcaccatgctaccaaggaagagcctgtagttcacaatattaggctg
cctaagcagagcactgttggagatgttcttaatgaaataaagacaaaggtcgaattgtct
catccaaatgctgagcttagattgcttgaagtattctatcacaagatttacaagatcttt
ccattgaccgagaaaattgaaaatataaatgatcagtactggacattacgtgccgaggaa
atcccggaagaagagaagaaccttggaccacaagatcgcttgattcatgtttaccacttc
accaaagaggctgcactgaaccaaatgcaagtgcaaaactttggggagcctttctttctg
ataattcgtgaaaatgaaactctagaagatgttaaagtccgcatccagaggaaattggag
gttcctgatgacgaattctctaagtggaagtttgcatttctgtctctgggacgtccagag
tatctacaagattcagatgttgtatctagccgttttcagagaagagatgtgtatggtgct
tgggagcagtaccttgggttggagcactcagacaccacccctaaaaggccctttacagca
aatcagaaccgtcacacatatgagaagccagtgaaaatatacaactag
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integrated database retrieval system
