Cynara cardunculus var. scolymus (artichoke): 112505928
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Entry
112505928 CDS
T05604
Name
(RefSeq) glutamate receptor 1.2-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112505928
Ion channels [BR:
ccav04040
]
Ligand-gated channels
Glutamate (ionotropic)
112505928
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Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
112505928
NCBI-ProteinID:
XP_024965732
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Position
LG_2
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AA seq
799 aa
AA seq
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MGIVLDMESLIGRSIHKGIAMAISDFYALNHSYRTRIVLHTMDSKGDPLEALSAVDHLLK
NVKVKAIIGPETHLQPKLLSLFADKAKVPIFSIAASSSMEYPYLFHIKDDESMMAKCVAA
VVESYKWRHAIFVYEDTEDGREILPYLVESFQDKSIQITYRNAISLLATSDEIIEQLHKL
MNFQTTVIIVHMSPSLASRLFLNAKKLGMMSEEYAWILTEKTVDVLRSTDFEVIESIQGV
LGFRPYVPASSRLHNLTARWHNFFYRKYPTSVTKEVPVFALRAYDTIWALAESFEKVEVL
ENGPFFLNEVLKIRFKGISGEFQLSEGKVISNGYEIMNAIDYGEKRVGYWTLSEGIKEAY
PLINRGHRYSSMHTEAVIWPGRSTTAPKGRMLHTFPGKELNIGVLKIKNFKHFMDVENDV
EKNVTNATGFSIDVFNACIRALTYEVPHKFILFENASYDDLVQKVYNQEIDAVVGDSTIL
ANRSEYVDFTSTYSDLGVGTLARIKKNDMWFFLKPLDVGLWLTAIASLMVTGFVVWAIEC
MNQESESSPAQRIGTIFWLILLTIFFAQREKLSNNLSRFVMFVWLLVVLILITSYTATLA
SLLTVEQFELVSKGGIVGFHGGSFMRGVTVSNLHFEDNMKRAYYSYEDYAHALSEDGEAD
AIVDEIPYIKMFLGKYSSGDYALVSSQPITSGFGFVSSPFLSITCTILHAHISNEKIFQK
GSPLVQDVSREIAKMRLDGTLASLEKKWFENRLSIPSRNSTMSKALKLDRFGGLFIISGV
TSALALMISSFRGCWRLLI
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggggattgttctagatatggagtcattaatagggaggtccattcacaagggcattgcc
atggccatatctgatttttatgctcttaatcacagttacagaacgagaatagttcttcac
acaatggactccaagggagatccattagaagctctttcagctgtagatcatcttctcaaa
aacgtgaaggtgaaagccatcataggcccagaaacgcatcttcaacccaagttattgtcc
ttgtttgctgacaaagctaaagttcctatattttctattgctgcttcatcttcgatggaa
tacccttacttgttccatatcaaagacgatgaatccatgatggccaaatgcgttgctgcc
gttgtggaatcatataaatggaggcatgctatcttcgtttatgaggacactgaagatggg
agggagatcttaccctatctggttgagtcattccaggataaaagcatccagatcacttac
agaaatgccatttctctcttggccacaagtgatgaaataattgaacaattacataagctc
atgaattttcagacaactgtaattattgtacatatgtcaccttcacttgcatctagactt
ttcttaaatgcaaaaaagttgggaatgatgagtgaagaatatgcatggattttaacagaa
aaaacagttgacgtcttgcgatcaacagactttgaagttatcgagtcaatacaaggggta
ctaggttttaggccgtatgttccggcatcaagcaggctgcataacttaacagcaagatgg
cacaacttcttttacagaaagtaccctacatcggtaacaaaggaggtacctgtgtttgcc
ttacgggcatacgacacaatctgggcacttgcggagtcttttgagaaagttgaagtccta
gaaaatggtcctttttttctaaacgaggtcttgaaaatcaggtttaagggcataagtggt
gagtttcaacttagtgaaggaaaagttatctccaatggatatgagattatgaatgccatc
gactatggtgagaagcgagtaggatattggacattatcagaaggtatcaaggaagcatac
cccttgattaaccgcggtcatagatattctagtatgcatactgaagctgttatctggccc
ggacggtctacaactgctccaaaaggtcggatgttacacacatttcctggtaaagagtta
aacattggtgttctaaagataaaaaactttaagcacttcatggatgtagagaatgatgtg
gagaaaaatgttacaaatgccactgggttctctatagatgtattcaatgcttgcattcgc
gcgttaacatatgaagtacctcacaaattcattttatttgagaatgccagttatgacgat
ctggtgcagaaggtgtataatcaggaaattgacgcagtcgtgggggattcaacaatcttg
gccaacagatctgagtatgttgactttacgtcgacttacagtgacttgggtgtaggaaca
cttgccagaatcaagaaaaacgacatgtggttcttcttgaagccactggacgtgggtcta
tggctaactgctattgcttctcttatggtaactggctttgtggtttgggcaattgaatgt
atgaatcaagaatctgaatcttcaccagctcaacgaattggaacaatcttctggctcatc
ctattgaccatttttttcgctcaaagagagaagctgtcgaacaatctgtcaagatttgta
atgtttgtttggttactagtggtgcttatcttgatcacaagctacacagcaacattggct
tcactgttgacagttgagcaatttgaattggtgtcaaaagggggaattgtggggtttcat
ggaggttcttttatgagaggagtaacagtcagcaatttgcactttgaagataatatgaag
agggcatactactcatatgaggattatgcccatgctttatcagaagatggtgaagctgat
gccattgttgatgagattccttacatcaagatgtttcttggcaagtactcatcaggcgac
tatgccttggtttcgtctcaacccatcacttctggttttggctttgtaagttcccctttc
ctctccatcacttgcactattttacatgcacacatatcaaatgagaagatcttccaaaaa
ggttcgccgttggtacaagatgtgtcaagagaaatcgccaaaatgagattagacggaact
ctagcaagtttggagaagaagtggtttgagaatcggctttctatcccgtcaaggaattct
acaatgtccaaagccttgaagcttgatagatttggtggtttgtttattattagtggggtg
acttcagctttagcccttatgatctcttcatttagggggtgttggcgattgcttatttga
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