Cynara cardunculus var. scolymus (artichoke): 112506288
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Entry
112506288 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112506288
KO
K17925
sorting nexin-13
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccav04990
]
112506288
Domain-containing proteins not elsewhere classified [BR:
ccav04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112506288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
112506288
NCBI-ProteinID:
XP_024966066
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All DBs
Position
LG 2:complement(63932722..63939776)
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AA seq
1035 aa
AA seq
DB search
MAIKAMETLQDLIEEAKLRTVWWAICIFAITYILTHTSKSMWMNVPIAVFLVSGVHILLN
EVDFHWKIRKPRGHSYLAHLEKKQLSVNDSRLSTLPPLPKWKRKIDSPVVEAAMEDFVKK
LLQEFVVDLWYSDITPDKEAPQLIHAILMDVFAEISTRVKDINLVDMLTRDVVDLVGDHL
ELFRKNQAAIGREVMVTLSSDERDERLKHHLMTSKELHPALISPESEYKFLKRIMGGVLA
AVLRPREAQCPLVRCIARELITCLIMEPVMRFASPGHINELLEIIFLANNNKGETEAGDQ
SSNVVGPTQNQTQNQSAATNIVKPPESASTKSGSSSGQMSGQTLSTPNNQKEALLNPSGT
IVSGPVQDEPLHARTSDWARVLEAATQRRTEVLQPENLENMWTKGRNYKKKAQKNVAPGH
QPPSINGSGISSVINRKDLGKEISPHKPEISTSIGKTAAQIPPGPYADDQQKDPNLDANG
LSDQVKTPALCDLDNENSNGSSICDLNIQTQPENKSPIQVGGSIISEFYSANAGRDSDAL
NVNSASDKGSRSEGYVPKLKCRVLGAYFENIDSKSFAVYSIAVTDAGNKTWFVKRRYRNF
ERLHRHLKDIPNYTLHLPPKRILSSSTEDAFVHQRCIQLDKYLQDLLSIANIAEQHEVWD
FLSMNSKSYSFGRSSSMVRTLAVNVDDAVDDIVRQFKGVSDGLMRKVVGPLSPSGASASA
ANRTVPWKAEEPSDSVLKQTTLDTTNNLSDNEEGDKDRTPQHEEMESAAQANGQHLDNEL
NSKVFPPRVLKSDELNRSLELDKKNISEVRSEILSLAANFPSNSGLKEDPLGVPAEWTPT
NVSVPLLNLVDKIFQLNRRGWLRRQAFWISKQILQLIMEDAIDDWLIRQIHWLRRDDIVA
QGIRWIQEVLWPEGIFFLKLNRSQMDSSQPNEGSSRTTSGSKGNKQASFEEQLEAARRAS
DIKKMIFKGAPTTLVSLIGHKQYKRCAKDVYYFLQSAVCLKQLGYGLLELALITVFPELQ
DVISNVHEKRKSEPL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcaataaaggctatggagacgttacaggatctgatcgaagaagcaaagcttcgtact
gtgtggtgggctatttgtattttcgctatcacttacatcttaacccacaccagtaaatca
atgtggatgaatgttcctatagcagtttttctggtatcaggggttcatattttattaaac
gaagtggatttccattggaagatcaggaaaccccgcggacattcatatttggcacacctc
gagaaaaaacaactgtctgtgaatgattctcgtctttccaccctgcctcccctgcctaaa
tggaagaggaagattgattctccagtagtcgaggctgctatggaggattttgttaaaaag
ctgttgcaagaatttgtggttgatctgtggtattctgatataacgcctgacaaggaagca
ccacagctgatacatgcaattcttatggatgtttttgccgaaatttccacaagagtcaaa
gacataaacctagttgacatgctaacgagggatgtagttgatctagtaggggatcatcta
gagcttttcaggaaaaaccaagctgctattggcagggaggttatggtgacactatcttct
gatgaaagagatgaaaggttgaaacaccatctcatgacttctaaggagcttcatccagct
ttgatatcacccgagagtgagtacaagtttcttaagcggattatggggggagttttggcc
gcagtgctcagaccacgagaagctcaatgccctttagttcgatgcattgcacgggagctt
ataacatgcttgataatggaacctgtaatgagatttgcaagccctgggcatatcaatgag
ttgcttgagattattttcttagccaacaataacaagggagagacagaggcaggtgatcag
tcatctaatgtcgtgggtcctacccagaatcagacccagaatcaatctgctgctacaaac
attgtaaaacctccagagtctgcttccacaaaaagtggctcctcttctggtcaaatgagt
ggtcagactttgtctacacctaacaaccaaaaggaagcacttctaaacccatctggtaca
atcgttagtggcccagttcaagatgaaccattgcatgcacggacctctgattgggctcgg
gttcttgaggcagctacccagagaaggacagaagttctccagccagaaaatcttgaaaat
atgtggaccaaaggaagaaactataagaagaaagctcagaagaatgttgctccaggacat
caacctcctagcataaatggttcaggaataagcagtgttatcaacagaaaagatctaggg
aaggaaatatcaccccataaacccgagatttccaccagcataggtaagactgcagcacag
atcccgccagggccttatgcggatgatcaacaaaaagacccaaatcttgatgctaatggt
ttgtctgatcaagtcaagacaccagctctttgtgatttagataatgaaaattctaatgga
agtagcatatgtgatctgaacattcaaacccagcctgaaaataaatctccaatccaagtc
ggtggatccatcatctcggagttctatagtgcgaatgctgggagagatagtgatgcactt
aatgttaatagtgcttctgataagggatcacgcagtgaaggatatgttcccaagcttaag
tgtcgggttctaggagcatactttgagaatattgattcaaaatcctttgcagtctattcg
attgcggtgacggatgctggtaataagacttggtttgtaaaaagaagatacaggaatttt
gagagattacaccgccatcttaaggacattcccaattatacgttacatttgccacctaaa
aggatactctcgtctagcacagaggatgcatttgttcatcaacgttgtatacagcttgat
aaatatcttcaagaccttttgtctatagctaatattgctgagcaacatgaagtgtgggac
ttcttgagcatgaattcaaagagttactcttttggaaggtcgtcatcaatggtgagaacc
ttagcagtcaatgtggacgatgctgtggatgatattgtacgtcagtttaaaggagtttca
gatggtctaatgcggaaagttgttggccctttgtccccttctggagcttctgcttcagct
gcaaacagaaccgtgccatggaaggctgaagaaccatctgattcagtgttaaagcaaact
accttggacacgactaacaatctttctgataatgaggaaggtgacaaagatcggacacct
cagcatgaggaaatggagtctgctgcacaagctaatgggcagcatttggacaatgagttg
aactcaaaagtattcccacccagggtcctcaaaagtgatgaactgaatagaagcttggaa
ttagacaagaaaaatatttcagaggtgcgatctgaaatactcagcctggctgcaaatttt
ccttcaaattctggtctgaaggaagatccacttggtgtgccagcagagtggaccccaaca
aatgtaagtgttcctttgctaaatttggtagacaagatatttcaactcaacagaagaggc
tggttaagacggcaagcgttttggatatcaaagcaaattttgcagctgattatggaagat
gccattgatgactggctcataaggcaaattcattggctcagaagagatgacattgttgct
caagggattcggtggatccaagaggttctgtggcctgaaggtatattttttctgaaacta
aatagaagtcaaatggattcttctcaaccaaacgaaggatcttctcggactacatctggc
agtaagggtaataaacaagcgtctttcgaggagcaacttgaggctgctcgtagagctagc
gatatcaagaagatgatattcaagggagcaccaactacattggtcagcttgatcggacat
aagcaatacaaacgatgtgctaaagacgtatattattttctccagtctgctgtgtgtttg
aagcaacttggctacggtttacttgaacttgcacttataacggttttcccggagctgcaa
gatgtcatatcaaacgttcatgagaagagaaaatccgagccgctgtag
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