Cynara cardunculus var. scolymus (artichoke): 112506315
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Entry
112506315 CDS
T05604
Symbol
LOC112506315
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00040
Pentose and glucuronate interconversions
ccav01100
Metabolic pathways
Module
ccav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112506315 (LOC112506315)
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112506315 (LOC112506315)
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112506315
NCBI-ProteinID:
XP_024966091
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Position
LG_2:65660809..65662331
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AA seq
398 aa
AA seq
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MGKERWSQRAVCCLLLMALMARNHAAVVDVKTKGAKGDGKTNDGPAIVDAWKAACAGPPP
SSVLFPPGIYMAFPPIDLMGPCKGPIEFKATGATIKAPPELAKFKTDAWIWFTKVDSLTM
TGGTYDGQGQETWKNNKCSTSGTCSLPSTIKLSFVKNALVKDVTSANAKFFHMFIVDCEN
TRLDHVTIDAPGNSVNTDGIHVGRVSGVNITDTNIKTGDDCISFGDGSKNVHVERVTCGP
GHGISIGSLGRYPNEAPVAGIWIKNCTFTGTLNGVRIKTWPGGTPGTASDMHFDDIIMTN
VGTPILIDQLYCPYSPCQKGPSKVKISNVSFRKIRGSSSTKIAIRLACSPGLPCDNVEVA
DINLTFKGPGGPATSECSSVKPKVVGQVVPPACPGGPK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaagatggtctcaacgagctgtatgttgcttgttgcttatggcattaatg
gcgaggaaccatgctgcagtcgttgatgtaaaaactaaaggtgccaagggcgatggtaaa
accaatgatggcccggcgatagtggatgcttggaaagcagcatgtgcaggacctccgcca
agctcggtgttgtttcctccagggatttatatggcatttcctccaattgatttaatgggt
ccatgcaagggtccaattgagttcaaggccactggagccaccatcaaggccccacctgag
cttgcaaagtttaaaaccgatgcttggatctggttcacgaaagttgatagcttgactatg
acaggtggtacatatgatggccaaggccaggaaacttggaagaataacaaatgctcaact
agtggaacttgctcgttaccatccactatcaaattgagtttcgtgaagaatgcattggtg
aaagacgtaacatctgccaatgccaagttcttccacatgtttatagtggattgtgagaac
acccgccttgaccacgttaccattgacgcaccgggaaacagtgtcaacacggatggaatt
cacgtcggaagggtaagtggagtcaacatcacagacacaaatataaagactggcgatgat
tgcatttcttttggagatggaagcaagaacgttcatgtggagcgagtgacgtgcggacca
ggtcatggcatcagtatcgggagcctgggcagatacccaaatgaagcacctgtagcagga
atctggattaaaaactgcacattcactggcaccttgaacggagtgaggatcaagacctgg
cctgggggtacaccgggaactgccagcgacatgcattttgatgatatcatcatgaccaat
gtgggaactcccatattgatcgatcaactatattgcccttatagtccatgccagaaagga
ccgtcgaaagtgaagatatcgaatgtgagctttaggaagatcagaggaagctcatcaact
aagatagcaataaggcttgcttgcagccctgggttaccatgcgacaacgtggaggtggct
gatatcaacctcacattcaaaggacctggaggacctgccacctctgagtgttctagcgtc
aaacccaaagtcgtcggtcaagtcgtccctccggcttgtccaggtggcccgaaataa
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