Cynara cardunculus var. scolymus (artichoke): 112506431
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Entry
112506431 CDS
T05604
Name
(RefSeq) pleiotropic drug resistance protein 3-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112506431
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112506431
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112506431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
RsgA_GTPase
AAA
AAA_30
AAA_16
ABC_trans_N
AAA_25
AAA_22
AAA_18
Rad17
AAA_29
AAA_28
DUF2304
AAA_5
AAA_19
NACHT
RuvB_N
RNA_helicase
nSTAND3
PilE_C
AAA_7
AAA_11
ATPase_2
Motif
Other DBs
NCBI-GeneID:
112506431
NCBI-ProteinID:
XP_024966227
LinkDB
All DBs
Position
LG 2:56512166..56530593
Genome browser
AA seq
1455 aa
AA seq
DB search
MAQLVGSEEIESLRIELSDIGRSLRSSFRLHTSSLHSNSEIRSVNNHDETDEYLLQWAAI
DRLPTFERLRSSLFDEENGHVKGKKVVDVTKLLAPERHMFIEKLIKHIENDNLQLLQKLR
KRTDKVGVQLPTVEVRYKNLRVEAECEVVHGKPLPTLWNSLRSMLSDIVMIPGLKSKRAK
ITIIKDVSGVIKPGRMTLLLGPPGCGKTSLLKTLSGNLNRSLKITGEISYNGYKLEEIVP
QKTAAYISQEDMHIPEMTVRETLDFSSRCQGTGSRAEIMIEVNKREKEGGIIPDPDVDTF
MKAISIEGQKKTLQTNYILKILGLDICADTMFGDAMRRGISGGQKKRLTTGEMIVGPTKA
LFMDEISNGLDSSTTYQIITCLQHLAHITDASVLISLLQPSPEAFDLFDDIMLMAEGMIV
YHGPRSSVLEYFEGIGFRCPERKGVADFLQEVVSRKDQAKYWCQTEQAYNYVSVQTLSMR
FKESYLGKEVNEVISKPFTRLQSHENAISFHVYSLSKWALFRACMSREILLMKRNSFIYI
FKLVQLLIIALITMTVFFRTRLKVDVLDANYYLGSLFYALVILLVDGFPELSMTVARLSV
FYKQRDMYFYPAWAYAIPASILKIPLSMLEAILWTCLTYYVIGYSPEPERFFRQLVLLFA
IHFTSISMFRFLASFFQTVVACTTAGSISILFLLCFGGFILPHTSMPAWLKWGFWLSPLS
YGEIGLAVNEFLSPRWNKMTSTNTTIGVQTLQSRGLDFDGYYFWISLGALLGFALLLNIG
FILALSYLKAPGTRAIISKEKLSQAHGSEGSKHHTHMDKTTNMSNTSVSEEPTEDTYSSS
YLAGKMVLPFEPLTITFQDIHYHVEPSQEMREHGFIGKRLQLLSDITGAFRPGVLTALMG
VSGAGKTTLLDVLAGRKTSGIVEGEIKIGGYPKVQDTFARISGYCEQTDVHSPQITVEES
VIFSAWLRLHPEIDSQTKYKFIEEILETVELYAIKDALVGIPGVSGLSTEQRKRLTIAVE
VVANPSIIFMDEPTTGLDARSAAIVMRAVKNIVDTGRTIVCTIHQPSIDIFEAFDELILL
KNGGRMIYCGPLGHHSSRVIEYFESISGVPKIRDNYNPATWMLEVSSASVEAELGVDFAR
IYSTSTLYKSNKDLVNTLSKPPPGSEELYFPTRFPQNGWGQFKACLWKQHLSYWRSPSYN
LMRSLHMLFASFTFGLLFWDQGRKIHNQQSLFNILGSMFAAVIFCGINNSSSVLPYVSVE
RTVLYRERFSGMYASWAYALAQVTIEFPYLFAQSLAFVCITYPMIGYYWSAYKVFVYFYA
FMCTLMYFTYLGMLLVSITPSFPVAAILQSAFYTMFNLFGGFLIPKPKIPGWWIWMYYLT
PTSWSLNAMLTSQFGDVKKEIEVFGETKSVEAFLRDYFGFHHDQLPLAYVLLALYPIILA
SLFAYCISKLNFQRR
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggctcaactagttggttctgaagaaatagagtccctgagaattgagctgtcagatata
ggaagaagtttaagatcatctttccgtcttcatacatctagtttgcattctaattcagaa
atacgttctgttaacaatcatgatgagacagacgagtatcttctacagtgggctgcaatc
gatagattgccaacatttgaacgtttgaggtcatcgttgtttgatgaagaaaatggacat
gttaaaggaaagaaggtggttgatgtcacaaaactccttgctcctgagcgacacatgttt
attgagaagctcatcaaacacatcgagaatgacaaccttcagttgttgcagaaacttagg
aaacgaacagacaaagttggtgtgcaattacccactgtggaggtgagatataagaatctt
cgtgtggaagctgagtgtgaagtcgtccatggcaaacccctcccaactctctggaactct
ttgcgaagtatgctttctgacattgtcatgatacctggtttgaagtctaaaagggctaag
ataaccatcataaaagacgtcagtggtgtcattaagccaggaaggatgactctgctgctt
ggtcctccaggatgtgggaaaacctctttgttgaaaacactttcagggaacctaaacaga
tctctcaagattactggtgaaatttcttacaatggatacaaactagaagaaattgtccct
cagaaaacggctgcctatataagccaagaggatatgcatatcccggagatgactgtaagg
gaaacactagatttctcatctcgttgtcagggtaccggaagccgtgcagagattatgatt
gaggttaacaagagggagaaagaaggggggattattccagatccagatgtagacactttt
atgaaggcaatttccatcgagggacaaaagaaaactcttcagacaaactacatcctgaag
attcttggccttgatatatgtgctgatacaatgtttggagatgccatgaggagaggaatc
tctggtggtcagaagaaaagattgactactggtgagatgattgttggtcccacaaaagct
ttatttatggacgaaatatcaaatggcctagacagctccactacgtatcagataatcact
tgtcttcagcatttggcacatataacagatgcttctgtactcatttcacttcttcagcca
tcaccagaagcatttgatctctttgatgatattatgttgatggcggaagggatgatcgtg
tatcatggacctcgcagtagtgttttagagtattttgagggtattggttttaggtgtcct
gagagaaaaggtgtagctgactttctccaagaggttgtctcaagaaaagatcaggcaaag
tattggtgtcaaactgaacaagcatataattatgtctcagtacagaccttatccatgaga
tttaaggaatcttatttgggaaaagaagtaaatgaggtaatttccaagcctttcacgaga
ttgcagagccatgagaatgccatttccttccatgtgtattctctatctaaatgggctctt
tttagagcttgcatgtctagggaaattcttctcatgaagagaaattcttttatctacatc
ttcaaattagtccagctcctcataattgcattaatcacaatgactgtatttttccgaaca
agattgaaggttgatgtacttgatgcgaattattatctcggttcacttttctatgcactt
gtgattcttctagttgatgggttcccagaattgtctatgacagtggcaagactttcagtt
ttctataaacagagggacatgtacttctaccctgcttgggcatatgcaattcctgcatcc
atccttaagattcccctgtcaatgctcgaagccattctttggacgtgtctcacttattat
gttatcggatacagccctgaaccagaaaggttcttccgccagctagtgctattatttgcg
atccacttcacatcaatatccatgttccgattccttgcatcattctttcaaacggtggtt
gcgtgtacaactgctggtagtatctcaatattgtttctgttgtgttttggtggcttcatt
ttaccacacacttcaatgccagcttggttaaagtggggattttggctttctccactgtca
tatggtgaaataggccttgcagtgaatgaattcctttctcccagatggaacaagatgacg
tctacaaacacaaccataggggtacaaacacttcaaagccgtgggttagactttgatgga
tactatttctggatatcacttggtgccttgttaggttttgcactgttactcaacataggc
ttcatcttggctttaagctacttgaaggctcctggtactcgtgccattatttcaaaggaa
aagctatctcaagctcatggaagtgaaggatctaaacaccacactcacatggataaaacg
accaacatgtccaatacttctgtctcagaggagcctacagaagatacttattcatcctct
tatcttgcaggaaaaatggtgttaccttttgaaccactaacgattacctttcaagatata
cattatcatgttgagccctcacaggaaatgagagagcatgggttcattggaaagagactt
cagttacttagcgatatcacaggggcttttagacctggtgttcttacagcactgatgggt
gtaagtggtgctggtaaaacaacacttcttgatgttcttgctggaaggaaaaccagtggc
attgttgaaggagagatcaaaatcggagggtatcctaaagtccaagatacctttgctagg
atttcaggttactgtgagcaaactgatgtacactctccccaaattacagttgaagaatca
gtgatattctctgcttggctccgtctgcatcctgaaattgattcacaaactaaatataaa
ttcatagaagaaatcctggaaacagttgagctttatgcgataaaagatgccttggttggc
attcctggggttagtggtctatcaacagagcagcgtaagcgacttacgattgctgtggaa
gttgtcgctaatccctccattattttcatggatgaacctacgacgggactggatgctaga
tcagctgccattgtcatgcgggctgtgaagaacattgttgatacaggaagaacaattgtc
tgtaccattcaccaaccaagcattgacattttcgaggcctttgatgagttaatcctcttg
aaaaatggcggacgtatgatctactgtggcccattgggtcaccattcaagtagggtcatt
gaatactttgagagtatctctggggtgcccaagattagagacaactataacccagcaaca
tggatgttagaggtatcttcagcatcagtggaagctgaacttggagttgattttgcacga
atatattctacttcaactttgtacaagagcaataaagaccttgtaaacacattaagtaag
ccgcctcctggttcagaagagttatattttccaacgcgtttcccacaaaatggttggggc
cagttcaaggcctgcctatggaaacaacacttgtcatattggagaagtccttcatacaac
ctgatgcgttctctgcatatgctttttgcatcgtttactttcgggttactcttctgggac
caagggaggaaaatacataaccagcagagtttattcaatatccttggttcaatgtttgct
gctgtaattttctgtggcataaacaactcctcttcagttctgccatatgtttctgtggaa
cgaactgttctgtatcgagaaaggttttctgggatgtatgcatcgtgggcttatgctctt
gcacaggtgacaatcgagttcccctatctctttgcgcagtcacttgcattcgtctgcatc
acgtatcccatgattggatattattggtcagcctataaggtttttgtgtacttctatgca
ttcatgtgcacattgatgtacttcacctatttgggcatgctgcttgtttcaatcacacca
agctttccagtggctgccattctacagtctgcattttacacgatgtttaacttgtttggt
ggatttttaattcctaaaccgaaaattccaggttggtggatatggatgtactatctgact
cctacttcatggtcgcttaacgcaatgcttacttctcagtttggtgatgtgaagaaggag
atcgaagtttttggggaaactaaatctgtggaagccttcttaagagattactttggattt
catcacgatcagttaccactggcgtatgtgcttcttgcactttatcccattattcttgct
tctctatttgcttactgtatatcgaaactcaacttccagagaaggtaa
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