Cynara cardunculus var. scolymus (artichoke): 112506436
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Entry
112506436 CDS
T05604
Name
(RefSeq) scarecrow-like protein 9 isoform X1
KO
K27753
GRAS family protein LISCL
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112506436
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Other transcription factors
GRAS
112506436
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GFIT
Motif
Pfam:
GRAS
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
112506436
NCBI-ProteinID:
XP_024966240
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Position
LG_2
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AA seq
758 aa
AA seq
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MDPRYEKTFSSEDGYGDGNGNGIQFGQGIMPVIQDNVNLNTDPILENTFSIYDPVNEGSS
GYQSSIYNQSYRGLKFPHLNNPPVPVVGSIPEDDYLHEDCDFSDAILGYISKVLMEEDIE
DRSCMHQESLDLQAAEKPFYDVLGKKYPPSPWPSHSSEGVLTSVDHSRESLDDFPSLAHN
TYVGSFSSCSGYSHDASNLQNVGALNVSYASSGSSNNTNYVTDGGLDDLCNENQMMWQFR
KGVEEANKFLPSGNSFLVSSNAGGFLPQDNNLGNVEGIISSNSRVRKNSDGDDIAEVEKQ
ERSIKQAAIFPDPTLRSEEMDLIFLSSLGRGKDALNSFRDTLRQETRKDTQKDKEEISLS
KGKGRGRGKGKGRGRKQNRKKEVIDLRTLLITCAQAVAADDRMTANELLKEIRQHASPFG
DGAQRLAHCFANGLEARLAGTGSQIHKALVSKKTCAADYIKAYHLYIASSPFRKISNFAS
NRTIREKSENATRIHIVDFGILYGFQWPTLIQRISDRKNGPPRLRITGIDFPQPGFRPAQ
RIEETGRRLEEYARHFNVPFEYISIAKRWENVKVEDLMLDEGEFLVVNCMYRSKNLLDET
VVVDSARNIVLNLIKKINPDIFIHGILNGSYNAPFFLTRFREALFHFSALFDMLETNVPR
ERAERMLLEREIFGREALNVIACEGWERSERPETYKQWHARNLRVGLVPVPLSRFIIKVA
GKKVNLYHKDFLIDEDNHWLLQGWKGRIIYAISCWRPA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagatatgagaaaacttttagttctgaggatggatatggagatggaaatgga
aatgggattcaatttgggcaaggaattatgcctgttattcaggataatgtgaatctaaat
actgatcctatacttgaaaatactttttcgatttatgatccggtgaatgaaggtagtagt
gggtatcaaagttctatatacaatcaaagctatagaggtttaaaatttcctcatttgaac
aatcctcctgtacctgttgtgggttcaattccagaggatgattatcttcatgaagattgt
gatttttcagatgcaattttgggatatattagtaaggtgcttatggaagaagacatagag
gacaggtcttgtatgcatcaagagtctttagatcttcaagctgcagagaagcccttttat
gatgttcttggcaagaaataccctccatccccatggccatcacattcctctgaaggagtt
ttgacctctgttgaccattctagagagagcctagatgattttccctctttagctcataac
acttatgttggtagtttcagtagttgtagtggctattcacatgatgcttcaaatctacaa
aacgttggagctctgaacgtatcgtatgcttcatctggatcatcaaacaacacaaattat
gtcactgatggagggttggatgatctttgtaacgagaatcaaatgatgtggcagtttaga
aagggtgtcgaagaagcaaacaagttccttccgagtggcaacagtttcttagtttcttcc
aacgcaggtgggttcttacctcaagataataatctgggcaatgttgaggggataatctcg
tcaaattcaagggtaagaaagaattctgatggagatgatatagctgaagtagaaaaacaa
gaaaggagtattaagcaggcggcgattttcccagatccaacgttgaggtctgaagagatg
gatttgatcttcctttctagtttgggacgaggtaaggatgctttaaactcgtttcgtgac
accttacgccaagaaacaagaaaggatacacaaaaagataaagaagagataagtttaagt
aaagggaaagggagagggagaggcaaaggcaaaggacgtggtaggaaacaaaaccgaaaa
aaagaggtgatagatttgagaacccttttaattacttgcgcacaggctgttgcagctgat
gatcggatgacagcgaatgaacttttgaaagaaatcaggcagcatgcttctccttttggt
gacggggctcagaggttagctcactgcttcgctaatggtcttgaggcacgtttggctggc
accggtagccagattcataaagcgttggtcagcaagaaaacgtgtgcggctgactatatc
aaagcttatcatctgtatattgcatcttcccctttcaggaagatttcgaattttgcttca
aacaggacaattagggagaaatcagagaatgccacgaggatacacatagttgattttggt
attctttatggctttcaatggcccactttgattcaacgtatttcagatagaaagaatggg
ccgccaaggcttcggataactggaatcgactttcctcaacctgggtttcggccagcacaa
agaattgaagagactggtcgtcggttggaggaatatgctcgccattttaatgtgccattt
gagtatatttccattgctaaaagatgggaaaatgttaaagttgaggatcttatgcttgat
gaaggtgagtttctagttgttaactgtatgtatcgatcaaaaaacttgcttgacgagact
gtggtggtggacagcgccagaaatatcgttctaaacctgataaagaagattaatccggat
attttcatccatggaattctgaacggatcttacaacgccccatttttcctcacccgattc
cgcgaggctctatttcatttctcagcgttatttgatatgctggaaaccaatgttccccgt
gagcgagctgagaggatgctgctcgagagagaaatctttggaagagaagcgttgaatgtt
atagcctgtgagggatgggaaaggagcgaaagaccagagacatacaaacaatggcatgct
cgcaatctgagggtagggttagttccagtaccattatctaggtttatcatcaaagtggca
gggaagaaagtgaatttatatcacaaagatttcttgatagacgaagataatcattggctt
ctgcagggatggaaaggaagaatcatttatgccatttcttgttggagacctgcttaa
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