Cynara cardunculus var. scolymus (artichoke): 112506465
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Entry
112506465 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112506465
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112506465
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112506465
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112506465
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112506465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
112506465
NCBI-ProteinID:
XP_024966294
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All DBs
Position
LG 2:complement(66553694..66567467)
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AA seq
652 aa
AA seq
DB search
MAGLQLQMTWQTNLLLKKRKNGPPLGFKNLGNTCYLNAVLQCLTYTPPLANFCLQHQHSA
FCMYSSCSTCSHLSRESLVQQDRKSDCPFCLLEKRIVRSLSIDLTLETPGKIIGGLKIFA
EHFRLGRQEDAHEFLRYVIDACHTTCLRLKKLQQQRRKFVSNGGGDSFGGSTVVKEIFGG
ALQSQVKCLACGNESNKVDEIMDISVDVLHSSSLKEAFQNFFQPEILDGNNKYKCDNCKK
LVAARKQMSILQAPNILVIQLKRFEGIFGGKIDKAIAFDEVLVLSSFMCKTSQDPHPEYK
LFATIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVFSEKVYILFFSRTKQR
PVLPNKTLATNGTKAYDCNGSDSSKLPKSGHITKSTESQQCVNHHSQKVDSGTSSKVGKV
LSGLQRKSDIAGNSGTKKFPATVNMKIIVHNKENNENNGDAKAPNSKKTSDKKIPLLEDK
NGFSQNKLVANGNVEIQRNSDEFVANGCKTDATRNGTATGKVPGYQDAHNGVAKSLPDKS
DSKRKHEEQKSCHLLSEDHQSLAKCEELKESLGKEASSFLRNCGWTDEVQSFMRAKKLCA
RDAGDDALQRNELKRKLIADAKANLISRLPESLKTNLIKRIRAFSQEKPYTD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctggtttgcaattgcaaatgacttggcagaccaatttgttattgaagaaacgcaag
aacggtcctccattagggttcaagaatcttggtaatacctgctacctcaacgccgtcctc
cagtgcttgacctacactcctcccctcgccaatttctgcctccaacaccagcactctgcc
ttctgtatgtactcctcttgttctacttgctctcatctttctcgtgagtccctggtgcag
caggacaggaagagtgattgtccgttttgtttactagagaagagaattgtacgatctttg
agcattgacttaaccctagaaacgcctggcaagatcataggcggcttgaaaatttttgca
gagcattttcgtctaggaaggcaagaggatgcacatgagttcctgcggtacgtcattgat
gcatgccataccacatgtcttcgcctgaaaaagttgcagcagcaacgacgcaagtttgtc
agtaatggaggaggtgatagctttggtggcagtacagtagttaaggagatatttggagga
gctctgcagagccaggtgaagtgccttgcttgtggcaatgagtccaataaggttgatgag
ataatggatattagcgttgatgtattacatagtagttctctaaaggaagcttttcagaat
ttttttcaaccagagattctggatgggaataacaaatacaagtgtgataattgtaagaaa
ttggtagcagcaagaaagcaaatgtctattcttcaagcacctaacattcttgtaattcaa
ctcaagaggtttgagggaatatttggcgggaagatagacaaagcaattgcttttgatgaa
gtattagttctttcgagcttcatgtgcaaaacaagccaggatcctcatccagaatataaa
ctttttgccaccattgtgcattcgggcttttcaccagattcaggacactattatgcttac
atcaaggatgcgattggtcgttggtattgctgcaacgattcttatgtttcagtttcaacc
ttacaggaggttttctccgagaaagtctatatcctttttttctctcgtaccaagcagagg
cctgttctacctaacaaaactttagctaccaatggaacaaaggcatatgattgcaatgga
agtgattcctcaaaacttcccaagtctggtcatattacaaagtctacagaatcacaacag
tgtgttaatcatcattcgcagaaggttgattctggaacgtcatccaaggttggcaaagtg
ctttctggtctacaaaggaagtcagacatcgctggaaattctggtaccaaaaagttccct
gcaacagttaatatgaaaatcattgttcataataaagaaaacaatgaaaataatggtgat
gcaaaagccccgaactcgaagaagacaagtgataagaagattccattgttagaggacaag
aatggttttagccaaaataaacttgttgcaaatggaaatgttgagatccagaggaacagc
gatgaatttgttgcaaatgggtgtaagaccgatgctacaagaaatggaacagcaacaggt
aaagtgcctggctatcaggatgcgcataatggtgttgctaaaagcctccctgataagtca
gactccaagaggaaacatgaggaacagaagtcttgccatttgctttctgaggatcatcag
tcactagcaaaatgcgaagaactcaaagaaagtcttgggaaagaagcttcttcctttttg
cgaaattgtggttggacagatgaggttcaaagtttcatgcgtgccaagaagctgtgcgct
cgagatgcaggcgatgatgcattacagaggaatgaacttaagaggaaattgatagctgat
gcgaaggctaatctaatttcacgacttcctgagtcgttgaaaaccaatcttatcaaacga
atcagagcatttagccaagagaaaccatataccgattga
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