Cynara cardunculus var. scolymus (artichoke): 112506468
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Entry
112506468 CDS
T05604
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112506468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112506468
03036 Chromosome and associated proteins [BR:
ccav03036
]
112506468
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112506468
Coactivators
SAGA/TFTC/STAGA complex
112506468
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
112506468
STAGA complex
112506468
TFTC complex
112506468
SAGA complex
112506468
SLIK complex
112506468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CdiA_C
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
112506468
NCBI-ProteinID:
XP_024966306
LinkDB
All DBs
Position
LG 2:complement(68624391..68633787)
Genome browser
AA seq
545 aa
AA seq
DB search
MNIVEKESIEVIAQSIGVGNLSPDVLPSLAADIEYRISEIMQEAVKCMRHAKRTAMTSDD
VDSALELRKMEPIYVASGDSLRFKRAARHKDLFYVEDKDVEFREVIAAALPKAPPDTAVV
NHWLAIEGVQPAIPENASLEALLTPFDNKKPDYKEDGVSIDIKTPVKHVLSIELQLYFEK
ITDLTVSRSNSIIFNKALLSLATDVGLHPLVPYFIYFVAEEVTRNLNNFQLLFALMRLVR
SLLQNPFLHIEPYLHQLMPSVMTCLVAKSLGNKLTDNHWELRNFTANLVASICRRFGNGY
HNLQLRVTRTLLHAFLDPAKAFPQHYGAIKGITALGSSVVRLLLLPNLDPYLHFLEPEMQ
LENQKNESRRHEAWQVHGALMCAAGLCIYNQLKMIPNLFSPPTHAIWKSNGNDLTINPNK
RKAGINNLMMEQTLKKTATGDGSVGGQHLVKVEVPGASSGFSITRGASDVGVHPLPRFLP
NDTIPGSSGRRDKFGSVAQTSSSVAVARAWKKEINAGHLLPKLYDLFGESMLPFVLSPEL
CNIFI
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgtagagaaagagagcattgaggtgattgcacagagcatcggcgttgggaat
ttatcgccggatgttttgccttctttagccgccgacattgaataccgtattagcgagatc
atgcaggaggctgtaaaatgtatgcgtcatgcaaagcggactgctatgacttcagatgat
gtggatagtgcccttgaactaagaaaaatggagccaatatatgttgcatccggggattct
ttgcgatttaaaagagctgccaggcataaggatttgttctatgttgaggacaaggatgta
gaatttagagaggtgattgcagccgcccttccaaaagcacctccagatacagctgtagtc
aatcactggctggctattgaaggggtacaacctgctattcctgaaaatgcttcgctggaa
gcacttttgaccccattcgataataagaaacctgattacaaagaagatggggtttcaatt
gacattaaaactcctgtgaaacatgtgctctctatagagcttcagctttactttgaaaag
atcacagacctcactgtaagtcgatcaaactcaatcatctttaacaaagcattgttgagt
ttggcgactgacgtaggactccatcctttggttccttatttcatatatttcgtagctgaa
gaggttactcgtaatttaaacaacttccagcttctttttgctttgatgcgccttgttcgg
agtcttctgcagaatccatttctgcacattgaaccatacctgcaccaactgatgccgtct
gtaatgacctgccttgttgcaaaaagccttgggaataagttaactgataaccactgggaa
cttcgaaacttcacagctaacctggtggcttcaatatgcagaaggtttggcaatgggtat
cataacctccaattacgtgtgactaggactcttcttcatgcgtttttggatccagcaaaa
gcatttccccaacattatggtgcgataaaagggattactgcccttggatcaagcgtggtg
cgtctgcttttgctgccaaatcttgatccatatctgcattttttagaaccagaaatgcaa
cttgagaatcagaaaaatgagagcaggaggcatgaggcctggcaagtgcatggggcttta
atgtgtgcagctggtctatgcatttacaatcagcttaagatgattcccaatctgttttct
ccaccaacacatgccatctggaagagtaatggaaatgacttgactataaacccaaataaa
aggaaggcgggcataaacaacttgatgatggagcagacacttaaaaaaacagcaacaggt
gacggttctgtaggagggcagcatttagtgaaggtcgaggtgccaggagccagcagcgga
ttttcaataactcgtggagcttctgatgtcggggtgcacccattaccaaggtttttgcca
aatgacaccattccgggaagcagtggtcggagagacaagtttggtagtgtagctcaaaca
tcatcttcggtggccgtggcccgagcatggaaaaaagaaataaatgctggacacttgctt
cccaagctttatgatctttttggtgaaagcatgcttccgtttgtactttccccagaattg
tgtaatatattcatctga
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