Cynara cardunculus var. scolymus (artichoke): 112506516
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Entry
112506516 CDS
T05604
Name
(RefSeq) KH domain-containing protein At5g56140 isoform X1
KO
K14945
protein quaking
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112506516
Spliceosome [BR:
ccav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112506516
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
Qua1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
112506516
NCBI-ProteinID:
XP_024966397
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All DBs
Position
LG 2:69587626..69594877
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AA seq
295 aa
AA seq
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MSSGRYMAYSPSPSAPHSPHIAGLRSAATAIVEQEKYLSELLAERNKLSPFVPVLPHCYR
LLNQEILRVTTLLGNASVLDQSGLEHASPLASGGMFSNGGANMNRWTTSPIQSEISVVQM
SALLQPSSAQSWLGSQGSSSGLVVKRTIRVDIPVASYPNFNFVGRLLGPRGNSLKRVEAS
TDCRVLIRGRGSIKDPAKEEKMRGKPGFEHLNEPLHILVEAELPVDIIDARLMQAREILE
DLLRPVDETHDFYKKQQLRELAMLNGTLREEGSQMSGSVSPFDNSLGMKRAKTRG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggcagatatatggcttactcaccttccccatcagcccctcactctcctcat
atcgccggtcttcgttccgctgccaccgccatcgttgagcaagaaaagtatctgtctgaa
ttactagcggaacggaataaattgagtccatttgtgcctgttcttccacactgttatcgg
ttgctgaatcaggaaatactgcgtgtaaccacactgttggggaatgcatcagttttagat
caaagtgggcttgaacacgctagccccctggcttcaggcgggatgttttcaaacggagga
gctaacatgaacagatggacaacttcaccaattcaatcagaaatttcggttgtgcagatg
tcagctttattgcagccttcatctgcacagagctggcttggttctcaggggagttcatct
ggtcttgtagtgaagagaacgattagggtcgatatccctgtggctagttatcccaatttt
aattttgttgggcggcttcttggaccgagagggaattctcttaagcgagtggaagcaagt
accgactgtcgtgttctgattagaggacgtggaagcatcaaggatccggcaaaggaagag
aagatgcgaggaaaaccggggtttgaacacctgaatgaacctctacacatactcgtcgaa
gcagaattacctgttgatataatagacgcccgtttgatgcaagctcgcgaaattcttgaa
gatttgcttagacccgtggacgagactcatgatttctataagaagcaacaactacgagag
cttgcaatgctgaacggcacccttcgtgaagaaggctctcagatgtcgggttcggtgtcg
cccttcgacaatagcctcggaatgaagagagcaaagaccagaggatga
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