Cynara cardunculus var. scolymus (artichoke): 112506537
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Entry
112506537 CDS
T05604
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112506537
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112506537
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112506537
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
112506537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
Cnd1
TOR1L1_N
HEAT_Maestro
PDS5
Adaptin_N
MMS19_C
INTS1_R4
Tti2
UTP20
MMS19_N
HEAT_DAAF5
Sec7-like_HUS
Rrn6_HB
Dopey_N
Motif
Other DBs
NCBI-GeneID:
112506537
NCBI-ProteinID:
XP_024966424
LinkDB
All DBs
Position
LG 2:2620776..2632805
Genome browser
AA seq
1433 aa
AA seq
DB search
MEEALEMARAKDTKERMAGVERLHELLEASRKSLSSSEVTALVDCCLDLLKDNNFRVSQG
GLQALDSAAVLSGEHLKLHFNALVPATVERLGDAKQPVRDAARRLLLTLMQVSSPTLIVE
RAGSNAWTHKSWRVREEFARTVTSAIGLFASTELPLQRAILPPILQMLYDPNPGVREAAI
LCIEEMYAQIGPQFYEELQRHQLPSSMVKDINARLERIEPRQRSSDIRVNTYAPPGSKQS
NLNPKRSSPKAKTSSREVSLFGGDSDITEKPVDPIKVYSEKELIREFEKIASILVPEKDW
SIRIGALQRVEGLVIGGATDYPCFRGLLKQLIGPLSTQLADRRSSIVKQACHLLNFLSKE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARILPRVADTAKHDRS
AILRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVGDAMSEVRSTARACYRMFSKT
WPDRSRRLFSLFDPVIQRIINDEDGGMHRRHASPSVRERNPQTSLSTQNSASSNLPGYGT
SAIVAMDRNPSLPSVASLTSGLFSSQPKSVGKGTERSLESVLHASKQKVTAIESMLRGLD
SGRVRSSSLDLGVDPPSSRDPPFPLAAPASNSLTSSLSLDTTTSGISKGNNRNGGLVLSD
IITQIQASRDSAKHSYRGNVGNETLSSLSSYSTRRASEKLQGRSSFEDNNDIREVRRSVN
LHTDRQYSDTPYRDSHFRDSHSSHVPNFQRPLSRKNVTGRMAANRRRSFDESQFSPGEMS
SYTDGPASLNDALSDGLSSGSDWNARVAAFNYLRSLLQQGPKGVQEVTQSFEKVMKLFFQ
HLDDPHHKVAQAALTTLADIIPACRRPFESYMERILPHVFSRLIDPKESVRQPCSTTLEI
VGKTYGVDSLLPALLRSLDEQRSPKAKLAVIEFAIVSFNKHAINSEGAGNSGILKLWLAK
LAPLVHDKNTKLKETAITCIISVYSHFDSTSVLNYILSLSVEEQNSLRRALKQHTPRIEV
DLMNYLQQKKDRQRSKSSFDPYDVVGTSSEEGYIAVSKKTPLFGRYSGSSIDSDSGKKWV
SAQESTQITSAVGRAALDGSEDQLYQGLDIGSNGVQNAKDAKYAVNASSETVASWAIRSE
HLESNTDMETASAPPLNGLVSSDNQQVAVGHNLGNEGPHDLELSLSKLASLKINSSPDAK
PSIPQILHLICNGNDECSTTTKRNALQQLVDASAANDSSIWTKYFNQILMVVLEVLDDAD
PSIRELALSLISEMLKNQREAMEDSIEIVIEKLLHLTKDTIPKVSNEAEHCLTLVLSQYD
SFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLQSFLPALFDAFGNQSAD
VRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTPIQE
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggctcttgaaatggcacgcgccaaggacaccaaagagagaatggccggagta
gagaggcttcatgaacttctagaagcttcgaggaagagtttgtcgtcttcggaagtcact
gctcttgttgattgttgcttggatctcttgaaggacaacaattttagggtttctcaaggg
ggtttacaggctcttgattctgctgcggttctttctggtgaacatctgaagcttcatttt
aatgccctagttcctgctaccgtcgagcgtctcggtgatgctaagcagcctgttcgcgat
gcggctcggcgcctcttgctaactctcatgcaggtttcatcaccaactctgattgttgaa
agagctggatctaatgcttggactcacaaaagctggagggttagagaagagtttgcaaga
actgtcacctctgctattggtctatttgcatcaacagagctacctctgcaacgtgcaatt
cttcctcctatattacagatgttatatgaccctaatccaggtgtgagagaagcggctatt
ttatgcatcgaggagatgtacgctcaaattgggcctcaattttatgaagaactccagcgc
catcaacttccatcatcaatggtaaaagatatcaatgccagactagagaggattgaacca
agacaacgctcttcagatatacgcgttaatacttatgctcctcctggttccaagcaatct
aatcttaatcccaaaagaagcagcccgaaggccaagacatcctctcgtgaagtatctctt
tttggaggggatagtgatatcactgaaaagcctgtagacccaattaaagtgtattctgaa
aaggagctgatccgtgagtttgagaagattgcttcaatccttgttccagagaaagattgg
tctatccgcattggagccttgcaaagagttgaaggccttgttattggaggtgcaactgat
tatccatgtttccgtggacttctaaagcaacttattggtcctttaagtacacaattagct
gatagaagatccagcattgttaagcaggcttgccacttattaaactttctatccaaggag
ctgctgggagattttgaggcatgtgcagagatgttcatcccggtccttttcaaacttgtc
gtgataactgtacttgtgattgcagagtccgcggataactgcattaaaacgatgttgcgt
aactgcaaagttgcccgcatacttcctcgtgtggctgatactgcaaaacatgaccgaagt
gcgatacttcgtgccagatgttgtgagtatgctttgttgatactggaatattgggcagat
gcacctgagatacaacggtcagctgacctttatgaagatcttattaaatgttgtgtggga
gatgcaatgagcgaggtacgatcaactgctagggcttgctacagaatgttctcgaaaact
tggcctgatcgttcccggcgcttattttcattgtttgatcctgttattcaaaggataata
aatgacgaggatgggggtatgcaccggcgccatgcatcaccctcagtccgcgagagaaat
ccacaaacatcgcttagtactcaaaattcggcttcttcaaatctacctggatatggaact
tcagctattgttgcaatggacagaaatccaagtttaccttctgtggcctctctcacatct
gggcttttttcatcacaaccaaagtccgttggtaagggaacagaacgcagccttgaaagt
gtgttgcatgctagcaaacagaaagttactgccattgagagcatgcttagaggtttagat
tccgggagagttagatcatccagtttggatctaggagtggacccaccttcgtctcgtgat
ccaccattccctcttgctgctcctgcttccaatagtctcaccagttctttatcattagat
acaactacttctggtatctcaaaaggtaacaatcgtaatggtggcttggtcttgtcagac
atcatcactcagattcaggcttcaagggattctgctaagcactcatatcgtggtaatgtt
ggaaatgagactttgtcatcactttcatcctactcaacaagaagagcttctgaaaaactt
caaggaagaagctcttttgaagataacaatgatatcagggaggtcagacggtcagtgaat
ttgcatacagatagacagtactcggacacaccatacagagattcacacttcagggattca
catagtagtcacgtccccaattttcagaggccactatcaagaaagaatgtaactgggcga
atggctgcaaacaggcgcagaagctttgatgagagccagttttctcctggagagatgtca
agttatacggatggtccagcttctctcaatgatgctctgagtgatgggcttagttctggt
tctgattggaatgcaagggttgctgcatttaactatctgcgctcattgctgcagcaaggc
cctaaaggagttcaagaagttacacaaagttttgagaaagtgatgaagttatttttccag
cacttggatgatccccaccataaagtggcacaagcagctctaacaacacttgcagatatc
attccagcttgtcgaagaccctttgaaagttacatggagagaatattaccccatgttttc
tctcggttaattgatccaaaggaatcagtaaggcaaccttgctcaacaacattagaaatt
gtcggcaaaacttatggtgtggattccctgttgccagctttgctccgctccttagatgaa
caacgatcccccaaggcaaaactggccgtaatagagtttgctattgtttccttcaataag
catgcaataaactccgagggtgctggcaatagcggcatcttaaagttatggcttgctaaa
ttagcaccattggtccatgacaaaaatacaaaactgaaggaaacagctataacatgcatc
atctctgtttactctcattttgattcaacatccgttttgaattacattcttagtttatcc
gttgaagaacagaattctttaaggcgagcgcttaagcaacatacacctcgtatagaagtg
gacttgatgaattatctgcaacagaagaaagacagacagcggtctaagtcctcttttgat
ccatatgatgttgtcgggacctcttctgaggaaggatatattgcagtatcgaagaagact
cccttgtttggaaggtattctggcagttccattgatagtgatagtggtaagaaatgggta
tctgcccaagaatccacccagatcactagcgctgttggtcgagcagcacttgatggaagt
gaggaccagctgtatcagggtctcgatattggttccaatggggtacagaatgccaaggat
gcaaagtatgcggttaatgcctcaagtgaaacggtggcatcttgggctatccggtctgaa
cacttagagagcaatactgacatggaaaccgcttcggcacctcctctcaatggactagtt
agctctgataatcaacaggttgctgttggccataatcttggtaatgagggcccacatgat
ttggaacttagtctttcaaaacttgcatctttaaagatcaattcttctcctgatgctaaa
ccaagcatccctcaaatccttcatctgatttgtaatgggaatgatgaatgttctaccaca
accaagcgcaatgctcttcagcagctagttgatgcttctgcggctaatgattcctccata
tggaccaagtatttcaatcaaattttgatggttgtacttgaggttttggatgatgctgac
ccatcaattcgggagcttgctctttcattgatatctgaaatgttgaagaaccagagagag
gccatggaagattctattgagattgtaattgaaaaattattacatcttacaaaggatacg
atcccaaaagtatcaaatgaagcagaacattgcttaactcttgttctgtctcaatatgat
tctttcagatgtttgagtgttatcgtgccattattggttactgaagatgagaaaactctt
gttacgtgtataaactgtttgactaagcttgtgggtaggctttcccaggaggaactaatg
gctcagttacaatcttttttgcctgctctttttgatgcttttggtaaccagagtgcggat
gttcgcaagactgttgtattttgtctagtagacatctacataatgcttggaaaagcgttc
ttgccatatttggaaggtcttaacagtacacagttgcggttagtaacgatatatgcaaac
cgtatatcacaagcgaggacggggactcctatccaggagtag
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