KEGG   Cynara cardunculus var. scolymus (artichoke): 112506621
Entry
112506621         CDS       T05604                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    112506621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112506621
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    112506621
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT POLH-Rev1_HhH BRCT_2 IMS_HHH PTCB-BRCT LIG3_BRCT UBM
Other DBs
NCBI-GeneID: 112506621
NCBI-ProteinID: XP_024966565
LinkDB
Position
LG 2:63059389..63070939
AA seq 1093 aa
MSLDSAKSGSNSKRSFNSTNSNKTGGNDYNNNNNKKKKKGEGGSGQKTLGMVXGSNSRSS
SRSSFRSSPFTDFGSYMAVKNKKLHEQFDAEASSSSHGGSGSKKPLFYGVSIFVDGYTVP
SSQELRGYMLKHGGRFENYFSRQRVTHIICSNLPNSKLKNLRSFSHGLPVVKPTWVLDSV
AADKLLSWAPYQLDQLASETNNQPKLSAFLALRSNLVPVDPTNGAMTSDINISEVSDSAE
DIKLPNQESDSHVHNSYDEAKVEEPICSNDYEKEVAETNEVVIGMPLAEMESKSSPCQPS
ASGSSRCSDFQNITKSSSMVSGSSNKGPSTTVDPNFVETYFKNSRLHFIGTWRNRYRKRF
PSSSDGFRPSRSISASSTCQRNTVIHVDMDCFFVSVVIRNRPELWDKPVAVCHSDNPRGT
SEISSANYPARAHGVRAGIFVRDAKALCPHLVIIPYDFEAYEEVADQFYSILHKHCNKVQ
AMSCDEAILDISDMEVDDPQLLVSLIRKEISATTGCTASAGISGNMLMARIATRSAKPDG
QCYLPPEKVNDFLEDLPIKALPGIGRAIEEKLKGRHVKTCGELRMISKESLQKDFGQKTG
EMLWNYCRGVDNRLVGMIQESKSVGAEVNWGVRFRDMKDCQHFLLSLCKEVSLRLHGCGV
LGRTFTLKVKKRKTDEEPVKYMGCGDCDNLSHSLTVPMATDDVNVLQRITKQLFSHFHID
VIDIRGIGLQVTKLESADNFKQGNERSSIRSWLSSAREGHEVSSSSRERRNQDIKEQIGD
HLYPSRSNSSVSANLFNREANRSSDVPPLSELDLEVLESLPPEILSEMNDLYGGKLKGFI
LKRKFEDVGVGTSSTLSGNAEGVREHFRPELVYNVAAVASTSQNVGVMPSSLSQIDASVL
QQLPEEIRDDILEVLPAHRNLETVSNNEAEPRDCSSSNQLWVGNPPQWVEKFKSSDGQIL
RFLSETYSELGSSCNLSSVLLRSVSAVCIGESNGECVDEISCLYEFLKQYIDLKVESDLE
EIHTCFRLLRRYTSEIYSCILFFLYLIAASSHWFRHQIEWQVGTSITSVQQNPYTPSGVR
QRKIWWNSPNLSM
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgagtttggattctgccaaatcaggttccaattcgaagagaagcttcaattcaacaaat
agtaacaagactggcggtaacgattataacaacaacaacaacaagaagaagaagaaggga
gagggaggcagtggacaaaaaaccctaggcatggtttrgggttctaattctcgatcttct
tctcgttcttcatttcgtagttcacccttcaccgattttggcagttacatggcagtgaag
aacaagaaactacatgaacaatttgatgctgaagcttctagctcgtctcatggtggttct
ggttccaagaaacctttattttatggggtttctatttttgttgatggatacactgtccct
tctagtcaggagttgcgtggttacatgttgaagcatggaggtcggtttgaaaattacttt
tcaaggcagcgtgttactcatataatctgcagcaatctacccaacagcaaacttaagaat
ttgaggtccttcagtcatgggctcccagtagtgaaacctacatgggtgttggattctgtt
gctgctgataagttgttaagctgggctccttaccaacttgatcagctagctagtgaaact
aataatcaaccgaagctgtcagcgttcctagctttgagaagcaacctggttccagttgat
cctacaaatggcgccatgacctcagatattaatatttctgaagtaagtgattctgcagaa
gatataaagctacctaatcaggaatctgattctcatgtgcataatagttacgatgaagca
aaagttgaggaaccaatctgcagtaatgattatgaaaaggaagttgctgaaacaaatgag
gtcgtaattggtatgccccttgcagaaatggaatccaagtctagtccctgccaaccttct
gcatctggaagcagccggtgttcagattttcaaaatattacaaaatcatcgtcaatggtt
tcgggatcttctaacaagggcccttcaactactgtagacccaaattttgtagagacttac
ttcaagaactctagactgcacttcataggtacttggagaaatcggtaccgcaagcgcttt
cccagttcatctgatgggtttagaccttcaaggtccattagtgcttcatctacatgtcag
agaaatacagttattcatgtcgacatggattgtttttttgtgtcggttgtgatcaggaat
cgccctgaactgtgggataagccagttgccgtatgccattctgataatcctcgtggtact
tctgaaatttcatcagccaactaccctgctcgagctcatggagtaagggctgggatcttt
gttagagatgccaaagcactttgtcctcaccttgttattattccttatgactttgaagct
tacgaggaggtggctgatcagttctatagcatattgcataagcactgtaacaaagtgcag
gctatgagttgtgacgaagcaattttagatatatccgatatggaggtggatgatcctcag
ctcttagtttcattgatacgaaaggagatatctgctaccacaggatgcactgcaagtgct
ggaatatctggcaatatgcttatggcccgcatagctacaagaagtgccaagccagatggt
cagtgctaccttcctcctgagaaggtgaatgattttttagaggatcttccaattaaggcg
cttccaggtattggtcgtgcaatagaggagaaattgaaagggagacatgttaaaacttgt
ggagagttgcggatgatatccaaggaatctcttcaaaaggattttggacagaaaactggt
gagatgttatggaattactgtaggggggtggataatcggcttgttggcatgattcaggag
agcaagtctgtaggtgctgaagtaaattggggtgtaaggttcagagacatgaaagattgc
caacattttcttctgagcctttgcaaggaggtctctttgcgtctacatggatgtggagta
ctaggacggacttttacgctcaaggttaagaagagaaagactgatgaagagccagtaaag
tatatgggctgtggggactgtgacaacctgagtcattcattgacggttccaatggctact
gatgacgtgaatgttctccagaggataactaaacaactcttcagtcattttcatattgac
gtcatagacatacggggaattggcctgcaggttacaaaacttgaaagtgcagacaatttt
aagcaagggaatgagaggagctctattcgctcttggctttcatctgctagagaaggacat
gaagtctctagttcatctagagagaggagaaatcaagacataaaggagcagattggtgat
cacctttatccgtcaagaagtaattcatctgtcagtgctaatttgttcaatcgggaagcc
aaccgcagttcagatgtcccaccgttgagtgaacttgatttagaagttcttgagagtctt
cctcctgaaattctttctgaaatgaatgacttgtacggtggaaaattgaagggctttata
ttaaaacgtaaatttgaagatgttggtgttggcacttcatccactttgtccggaaacgct
gaaggggttagagaacattttcgaccagaattagtatataatgttgctgctgttgcttca
acttcacaaaatgttggtgtgatgccatcatctttgagtcaaatagatgcatcagtgttg
caacaactccccgaggaaattagagatgacatacttgaggttcttcctgcgcacaggaat
ctggaaaccgtgtcaaataacgaggctgaaccaagggattgtagttcaagcaaccagctc
tgggttggaaacccaccacagtgggttgagaaattcaaatccagtgatggtcagatattg
agatttttatcagagacgtatagtgaattggggtcatcgtgcaatttatcttcagtatta
ctaagaagtgtttctgcagtatgtattggtgaaagtaacggtgagtgcgttgatgagatt
agttgcttatatgagtttctaaaacaatatatagatctgaaagttgaatcagaccttgag
gagatacacacatgttttcgtcttttaagaaggtacacatctgaaatatacagttgcata
cttttttttttgtatttgattgctgcatcatctcattggtttcggcatcagattgagtgg
caagtcggaacttctattacaagtgtacaacaaaacccttacacaccttcaggagtccgt
cagcgaaaaatatggtggaactctccaaatctaagcatgtaa

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