Cynara cardunculus var. scolymus (artichoke): 112506659
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Entry
112506659 CDS
T05604
Name
(RefSeq) myosin-15 isoform X1
KO
K10357
myosin V
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112506659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112506659
04131 Membrane trafficking [BR:
ccav04131
]
112506659
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112506659
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112506659
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112506659
mRNA cycle factors
P-body specific factors
112506659
Membrane trafficking [BR:
ccav04131
]
Others
Actin-binding proteins
Myosins
112506659
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112506659
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112506659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
PUMA_CC
AAA_22
AAA_16
Flp1_like
Zeta_toxin
AAA_19
AAA_lid_6
ABC_tran
Motif
Other DBs
NCBI-GeneID:
112506659
NCBI-ProteinID:
XP_024966640
LinkDB
All DBs
Position
LG 2:8086001..8123412
Genome browser
AA seq
1523 aa
AA seq
DB search
MMSNSNTSMSLRKGSKVWVEDRDTAWVAGEVTGFTAKQVQVITESGKQVLTSVEKLLLRD
ADVDYGGVDDMTKLAYLNEPGVLDNLKKRYALNEIYTYTGSILIAVNPFTKLPHLYNVHM
MEQYKGAPFGELSPHAFAVADASYRAMMGDAKNQSILVSGESGAGKTETTKLIMQYLTYV
GGRAASDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDASGRISGAAIRT
YLLERSRVVQITDPERNYHCFYQLCASGRDVDRYKLGHPSEFHYLNQSKIYELEGVSNAE
EYVKTRRAMDIVGISHDEQEAIFRTLAAILHLGNIEFSPGKEHDSSVVKDEKSNFHLQMA
ATLFMCDVKHLLATLCTRSIQTREGIIIKALDCDAAVASRDALAKTVYARLFDWLVEKIN
RSVGQDLNSRLQIGVLDIYGFECFKNNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRKE
EIAWSYIEFIDNQDVLDLIEKKPIGVIALLDEACMFPKSTHETFANKLFQNLRANPRLGK
AKFSETDFTIAHYAGKVNYQTDSFLDKNRDYVVIDHCNLLSSSKCCFIAGLFPVLPEESS
RSSYKFSSVASRFKQQLQALMDTLSSTEPHYVRCVKPNSVNRPQMFENQSVLHQLRCGGV
LEAVRISLAGYPTRKTYHEFVDRFGLIAMEVMGGSYDGRAMAEKILQKLKLENYQLGKTK
VFLRAGQIGVLDSQRAGVLDSAAKCIQLRLRTFIARRDFTSKRAAAVSFQAYCRGHLARI
IYAAKQEAAAAILIQKYIRGWLLRNAYTQQRLSAVLLQASIRGFITRQRFLHICEHRAAT
VIQARWRMFKVRSAFLHRQHDITAIQCLWRRKLAKRELRKLKQEANETGALRLAKSKLEK
QLEDLTWRLQLEKKLRGSNDESKSVEIAKLQKTVQSLVLELDAAKLATVNECNKNAVLQN
QLELSAKEKSSMEREIVGMADLRNENLYLKSSLSTLEEKNSALQSQLIEAKEDASSNHKK
LREVERTCSQLQKKLKSFEEKLLSLEKENHVLRQNTLSVSPKGSWPSHTKPFLEKYSGAL
ALPFSERKSTYETPTPTKSANPVSQGLTDSRRSKMTTERHQENSDILARCIKENLGFKDG
KPVAASVIYKCLXQWHAFESERTXVFDFIIENINNALKVADEGLILPYWLSNASALLCLL
QRNFRSNGFLTPISQRSGASSLPNGRLAQGYTPHKYIGFDDGISPLEARYPAILFKQQLT
ACVEKIFGLIRDNLKKEIAPLLNSCIQAPKNQRVHGAKSSRSPGGVPQQATGSQWEMIIK
FLDSLMDRLRGNHVPSFFIRKLTTQVFSFLNISLFNSLLLRRECCTFSNGEYVKSGLAEL
EKWIANAKEEFAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRIST
MYWDDKYGTQSVSNEVVAEMREMLNKDSQNLTSNSFLLDDDLSIPFSTEDIYMAIPAIDP
SDIEPPAFLSEYPSAQFLLQNPK
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtaatagcaacaccagtatgagtctgcgtaagggttccaaggtgtgggtggag
gatagagacaccgcctgggtcgccggtgaagtcaccggtttcacagccaaacaggttcaa
gttatcactgaatctgggaaacaggttttgacttctgtggagaagttattgctaagagat
gctgatgtagactatggtggagtggatgatatgaccaaattggcttacttgaatgaacct
ggagtgcttgacaatcttaagaaacgttatgctcttaatgagatatatacatacacagga
agtattctaattgctgtgaacccattcacaaagcttcctcatctttataatgtgcacatg
atggagcaatataagggagctccatttggtgagctaagcccccatgcgtttgccgtggca
gatgcatcttacagagcaatgatgggtgatgccaaaaaccagtcaatattggtcagcgga
gaaagtggggctggaaaaactgagacaacaaaattgatcatgcagtatcttacttatgtt
ggtggccgtgctgcgagtgatgacagaaccgttgaacagcaggttttagaatcaaacccc
cttttggaggcatttgggaatgcacggactgttagaaatgataattcaagtcgttttggc
aagtttgtggagattcagtttgatgcaagtggtagaatatctggtgcggcaattcgaaca
tacctacttgagcgatctcgtgtggtccagataacagatccggaaagaaactaccactgc
ttctatcagttgtgtgcatctggaagagatgtagatcggtacaagctaggtcatccaagc
gaattccattacttaaatcaaagcaagatatatgagttggagggtgtgagcaatgcagag
gaatatgtgaagaccagaagggctatggatattgttggaatcagtcatgatgagcaggag
gcgatatttcgtacgttggctgccattcttcatttgggaaacatagaattttctccaggg
aaagagcatgattcctcagtggtgaaggatgagaaatcaaattttcatctgcagatggct
gctactctttttatgtgtgatgtaaaacatttgctcgcaactctctgcacacgttccatt
caaactcgtgaagggatcataattaaagctcttgattgtgatgctgctgttgcgagtcgt
gatgctttagcaaagactgtttatgctcggctgtttgattggcttgttgaaaagatcaat
agatctgttgggcaagaccttaattctcgcttgcaaattggagttcttgatatatacgga
tttgaatgctttaagaataacagtttcgagcaattttgcattaattttgcaaatgaaaag
cttcaacaacatttcaatgagcatgtttttaagatggagcaggaggagtatcgcaaggaa
gaaatcgcttggagctatattgagtttatagataatcaagatgttttagatctcattgaa
aagaagcctatcggagtgattgctctactggatgaagcttgcatgtttcccaagtcaaca
catgaaacatttgcaaataagctgttccagaacttgcgtgccaacccaaggttagggaag
gcaaagttctctgagacagattttaccattgctcactacgctggcaaggtcaattatcaa
acagactcctttttggataaaaatcgtgattatgttgttattgatcactgtaatctacta
tcgtcttcaaagtgttgttttattgctggtctttttcctgtactgccagaagaatcttca
agatcctcgtataaattttcttctgtggcatctagatttaagcaacaactacaagctctc
atggataccctcagttcaaccgagcctcattatgtccgctgtgtgaagccaaactcagtg
aatcgccctcagatgtttgagaatcagagtgtgttgcatcagttacgttgtgggggtgtt
ttggaggctgttcgaataagtctggcaggatatcctactcggaaaacctatcatgaattt
gtagatcgttttggactcattgccatggaagttatgggtggaagttatgatggaagagcc
atggcagaaaaaatcctgcaaaaactgaaacttgagaattaccagttggggaagaccaaa
gttttccttagggctggtcagattggtgtattggactctcaacgtgctggggtcttggat
tctgctgcgaagtgcatccagcttcgacttcgaacgtttattgctcgcagggattttaca
tccaagcgagctgctgcagtttctttccaagcatactgcagaggtcatcttgctagaatt
atatatgctgcaaaacaagaagctgctgctgccattttgattcagaagtatattcgtgga
tggctgttgaggaatgcctatacgcagcaacgtctctctgctgtacttttacaagcaagc
atccgtggtttcattactcggcaaagatttttacacatatgcgaacatagagctgccact
gtaattcaggctcgatggaggatgtttaaggttcgttctgcatttcttcatcgtcagcac
gatattacagcaatacaatgtctttggagacggaaattggctaagagagagctccggaag
cttaagcaggaggccaatgagactggtgccctgcgcctagcaaaatctaagcttgaaaag
cagctggaggatctcacatggcggttgcaactagagaaaaaattaaggggttcaaacgac
gagtcaaagtctgtggaaattgcaaaacttcagaaaacagtgcagtcgttggtccttgag
ctagatgcagctaagttggctacagtgaacgaatgcaataagaatgcagtgctgcaaaac
caattggaattgtcagcaaaggaaaaatcttctatggaaagagaaattgtgggaatggct
gacctgagaaacgaaaatttatatttgaagagttcattgagtacattggaagagaagaat
tcagcgctgcagagccagcttattgaagctaaagaagatgcatccagtaaccacaaaaaa
ttgagggaggttgagagaacatgttcacaactccagaagaagctaaaaagttttgaggaa
aagcttttaagtttggagaaagaaaatcatgttctaagacagaacacattaagtgtctct
ccaaaagggagctggccaagtcacaccaagccttttcttgagaaatattctggtgcactt
gctctccccttcagtgaacggaaatctacatatgaaacacctactcctaccaaaagcgca
aatcctgtttcccaaggtttaactgattctcgtcggtcaaagatgactactgaaaggcac
caggagaactctgacatccttgcacggtgcattaaagaaaacctgggattcaaggatgga
aaaccagtggcagctagtgttatttataaatgccttyttcagtggcatgcctttgagtcc
gaaaggactrctgtatttgacttcattattgagaacatcaacaatgctcttaaggtggcg
gatgagggtcttatcttgccatactggttgtctaatgcttcagctcttctatgccttctg
caaaggaactttcggtccaatggtttcttgacaccaatttctcagcgttccggtgcgtct
tctttgccgaatgggaggcttgcccaaggatacactccacataaatacattgggtttgac
gatgggatctcgcctttggaagctaggtatccagcaatattattcaaacaacagttaaca
gcttgcgtggagaagatatttggcttgataagagataacttgaagaaggaaatagcaccg
ttgttaaattcatgcatccaggcgcctaaaaaccagcgagtacatggtgctaaatcttct
agatcgcctgggggtgttcctcagcaggctactggtagtcagtgggagatgatcataaag
ttcctggattctcttatggatcgtctacgtggaaatcatgtaccttcgtttttcattcgc
aagcttaccacccaggtcttttcattcctcaatatatcacttttcaacagtcttttattg
cggcgagaatgttgcacgttttccaatggggaatacgtcaaatctggtctagcagaactg
gagaaatggatagccaatgcaaaggaagagtttgcaggaacttcttggcatgaactaaat
tatatcagacaagcggtcgggtttctggtgatacaccagaaacggaagaagtctttggaa
gagattaggcaggatctatgtccggcattgactgttaggcaaatatatcgtataagtaca
atgtactgggatgacaaatatgggacccaaagcgtatccaatgaggtcgttgcggagatg
agggaaatgttgaacaaggactctcagaaccttacttccaattctttcttgttggatgat
gatctgagcattccattctctacggaagatatctacatggcgattcctgccattgatcct
tcagatatcgagccacctgcatttttgtctgaatatccttcagcacagtttctactacag
aatccgaagtaa
DBGET
integrated database retrieval system
