Cynara cardunculus var. scolymus (artichoke): 112506671
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Entry
112506671 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112506671
KO
K27803
homologous recombination OB-fold protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112506671
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112506671
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HROB
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
112506671
NCBI-ProteinID:
XP_024966665
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Position
LG 1:46773121..46782213
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AA seq
515 aa
AA seq
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MGTVLVIGFADGDTNTRPEPGTLPFLPPSATFSANHTTTCRLQLSPATPPPPPATSSIHP
TLAYRKPANRRPPNQRFGSLIVGLVEMGSLSLVSTDLSTKMELSWEEALDVDDSDLRSLT
LLRPCKQQRRRDETNPPTTTDLPLSQTLDFSHSPSQTDNSLPRNFNSVCQYEAPPPSRVI
PGPAGIVQAAKLLKTRDNGRFLGQEEPMATQGYIRRVVEDPEEDADFKCSPWLSAMEFFG
GDGMFNSVPSAHLGDIKRYLKNGKLDQVVAVVKSCAPNALGDLMVVLKDPTGTVSGTIHH
KVLTEGEFGKGSFVGSVLVLHKVSVFSPSRSANYLNITKRNLVKVFYKDGGPSQTSHGCR
TIDAAPSSDSVRRTTMLHGAFSQEPRAEGIANGTKTNAKSKPSLHIGDDQENTNPIVSTG
HHMIATDNEILKETDVIGSGENEHRAFDNCKQPTEGGGHKCGSNFVNDGNKNGVKGRDAV
RVHVEPAKANGSLPVWTDEQLNELFDVDFQDDMSF
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggggacggttttagttatcggtttcgcggacggggataccaatacccggcccgaaccc
ggcacgttgccattcctaccaccgtctgcaactttttccgccaaccacaccaccacctgc
aggctgcagctttctccggctaccccaccaccaccacctgcaacttcctccatccaccca
acccttgcatatagaaaaccagcaaaccgacgaccaccaaatcagagatttggttctcta
attgtgggcctcgtcgaaatgggttctctttccttagtttcaacggacctttcaacaaaa
atggagctttcatgggaggaagctcttgatgtagacgactccgatctccgatcactcacc
cttctccgcccttgcaagcagcagcgccgccgtgatgaaaccaatcctcctaccaccacc
gaccttcctctttctcaaaccctagatttctcacattcgccatctcaaaccgacaactct
cttccgcgaaacttcaatagcgtgtgccagtatgaagcaccacctccctctcgtgtaatt
ccaggccctgctggcattgttcaggctgctaagcttcttaaaacacgcgataacgggagg
tttttaggccaggaggagcccatggccacccaggggtatataaggagagtggttgaagat
cctgaagaggatgctgattttaagtgcagtccttggctttctgccatggaatttttcggt
ggtgatggtatgttcaattctgttccgagtgcacatctgggcgatataaagaggtatctg
aaaaatggaaaacttgatcaggttgttgcagttgtcaagtcttgtgctccaaatgcacta
ggtgatctgatggtagtgctgaaagatcctacaggtacagtttctggtactattcatcac
aaagtccttaccgagggtgagtttggaaagggtagttttgtaggatctgttctggtactc
cacaaggtttccgtgttttccccttcacgatcagcaaattatcttaacattacaaagagg
aatttggtaaaggttttctacaaggatggtggaccttcacaaacatcccatggatgtaga
accatagatgctgctcctagttctgattctgtgcggaggacgacgatgttgcatggtgca
ttttctcaagaaccacgagcagaaggaatcgcgaatggaaccaaaactaatgctaaaagt
aaaccgagtttgcatattggtgatgatcaagaaaacacaaatccgattgtgtcaactggg
caccatatgattgcaacagataacgaaatcttgaaagaaacagatgttatcggaagtggt
gaaaacgagcatagggcctttgacaattgtaaacaaccaaccgaaggtggtggtcataaa
tgtggttctaactttgttaatgatggaaacaaaaatggagtcaagggaagagatgcagtt
cgggttcatgtagaaccagcaaaagcaaatggttcactacccgtttggacagatgagcag
ttaaacgaactctttgacgttgattttcaggatgatatgtcgttttga
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