Cynara cardunculus var. scolymus (artichoke): 112506705
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Entry
112506705 CDS
T05604
Name
(RefSeq) proline--tRNA ligase, cytoplasmic-like
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112506705
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112506705
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112506705
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
112506705
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112506705
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112506705
Prokaryotic type
112506705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ProRS-C_1
tRNA-synt_2b
HGTP_anticodon
Motif
Other DBs
NCBI-GeneID:
112506705
NCBI-ProteinID:
XP_024966713
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Position
LG 2:complement(49073413..49080058)
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AA seq
514 aa
AA seq
DB search
MAGGKGDKPDNAKKSAAVAKSSKGRKKETGLGLTNTKDGNFGEWYSEVVTNGEMIEYYEI
SGCYILRPWTMSIWEIMQTFFDAEIKKMKIKTCYFPLFVSNNVLQKEKDHIEGFAPEVAW
VTRSGDSDLEVPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIR
SREFLWQEGHTAFATKEEADTEVLEVLELYRRLYEEYLAVPVVKGKKSEMEKFAGGLYTT
SVEAFIPNTGRGVQGATSHCLGQNFAKMFEINFEDEKGEKAMVWQNSWAYSTRTIGVMVM
THGDDRGLVLPPKVAAIQVIVIHVPYKDADIKEILNACSATVKALCDSGIRAEADLRENY
SPGWKYSHWEMKGVPLRIEIGPKDLANNQVRAVRRDNAAKIDIPMDGLVDKVKGMLDDIQ
QSMFDVAKQKRDACVQVAKTWDEFIEALSQKKLILAPWCDEEEVEKDVKTKTKGETGAAK
TLCSPFDQPELPEGTLCFASGKPAKKWTYWGRSY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctggtggaaagggagacaagcctgataatgccaagaaatctgctgctgttgccaaa
tctagtaagggaaggaaaaaggagacaggtctgggtcttacaaatactaaagacggcaac
tttggggaatggtattctgaggttgttacaaatggtgaaatgatagaatattatgaaata
tctggctgttacattctccggccatggacaatgtccatttgggagataatgcaaaccttc
tttgatgcagaaattaagaagatgaagattaaaacttgctattttccgctttttgtatcc
aataacgtgttacaaaaggagaaggatcacatagaggggtttgctcctgaggttgcttgg
gtcacgagatcaggtgactctgatttggaagtccctattgccattcgcccaactagtgaa
actgtcatgtatccctatttttctaagtggatcaggggacaccgtgacttgcctttaaaa
cttaatcaatggtgcaatgttgttcgatgggagttcagtaatcccactccatttatcagg
agccgtgagtttctttggcaagaaggacacactgcctttgcaacgaaggaggaggcagac
actgaggttctcgaagtccttgaactgtataggcgtctatatgaggagtacttggctgta
cctgttgtgaaagggaaaaaaagtgagatggagaagtttgccggtggactttatactact
agtgttgaggcctttattccgaatactggccgtggtgttcaaggtgcaacttcacattgc
ttgggccaaaattttgctaagatgtttgagattaactttgaagatgagaagggagaaaag
gctatggtctggcaaaattcctgggcatacagtactagaacgattggggtgatggtgatg
actcatggggatgatagaggcctggtcttaccccctaaagttgcagcaatacaagttatt
gtgattcatgtgccttacaaagatgcagatattaaggaaatattaaatgcatgttcagcc
accgtaaaagctttatgtgattcaggtattcgtgcagaagcggaccttagggagaattat
tcacctggttggaagtattctcattgggaaatgaaaggtgttcccttgaggattgagata
ggaccaaaagacctggccaataaccaggtgcgtgctgttcgtcgtgacaatgcagcaaaa
attgatattcctatggacggtttggttgataaagtaaagggtatgctggatgatattcag
caaagcatgtttgatgttgctaagcaaaaacgagatgcctgtgttcaagttgcaaaaact
tgggatgaattcattgaagcattaagccaaaagaaattgatcttggctccatggtgcgat
gaagaggaagttgagaaggatgtgaaaacaaagacaaaaggggagacaggagctgctaag
acgctttgttctccatttgaccagcctgaactgcccgaaggcacattgtgctttgcatcg
gggaaacctgcaaagaaatggacttactggggacgaagttattga
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