Cynara cardunculus var. scolymus (artichoke): 112506796
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Entry
112506796 CDS
T05604
Name
(RefSeq) protein TSS-like
KO
K03255
protein TIF31
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ccav03012
]
112506796
Translation factors [BR:
ccav03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112506796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
DUF5969
Motif
Other DBs
NCBI-GeneID:
112506796
NCBI-ProteinID:
XP_024966841
LinkDB
All DBs
Position
LG_2
Genome browser
AA seq
1750 aa
AA seq
DB search
MAPKASRGKPHKAKSEKKKKEEKALPTVVEITIETPDGSGLMLKGISTDKILDVRKLLAV
HVETCHVTNYSLSHEVRGRRLKDTVEIVSLKPCHLTVVEEDYTEDSAVAHVRQLLDIVAC
TTAFGGSFNSPKNTNVSVRSGSIAKESGSGDGQDKKSSKRDVSIGFDPSDAAEIYPPPRL
GQFYDFFSFSHLTPPIQYIRRSGRPFLEDKTDDDFFQIDVRVSGGKPMTIVASRKGFYAA
GKCALLSHSLVGLLQQMSRIFDGAYKALMKTFIEHNKFGNLPYGFQSNTWVVPPIVADNP
SVFPPLPVEDQNWGGNGGGQGGDGKHDRRQWAKEFSILAAMPCRTAEERQVRDRKAFLLH
SLFVDVSVLKSVAAIKQLTHSSKSSSNGLLDSFSHEDKIGDLLIRVTRDVPDASTKLDAK
IDGSRVLGLSPEELAKRNLLKGITADESATVHDTSTLGVVVVRHCGYTAVVKVAAEVNWD
GKPIPQDVDVEDQPEGGAHALNVNSLRMLLHKSSTTTLSSIAAQRVQVADVEDMHSANIV
VRKVLEESLQKIQAEVSKATKSIRWELGACWVQHLQSQDSGKPDYKKAEEAKVEPDVKGL
GKGLLKGIKKKSEDKINKTEEEVSTSNNTDMINKLDNHGKEETIKMDEEKEMLWRKLLPE
AAYMHLKESDTGLHLKSPDELIEMAHKFYDETALPKLVADFGSLELSPVDGRTLTDFMHT
RGLRMCSLGRVVELADKLPHVQSLCIHEMVVRAYKHILQAVIAAVDDIADLAGSIASCLN
ILLGTPNTSNVDSVTSNADELKWKWVESFMSKRFACQQKNEFHRTLRKFAILRGLCHKVG
LELVPRDYDMDSAYPFKKADIISMVPVYKHVACSSADGRTLLESSKTSLDKGKLEDAVNY
GTKALSKLVSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPD
TMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNV
HVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKL
GHEDLRTQDATAWLEYFESKALEQQEAARNGIPKPDASISSKGHLSVSDLLDYIAPDADM
KARDVQKKQARAKVIKGKAGQQEELLSDELQEDEVLSPSRENSSDKENKFELRNAQSVKK
TNLVQPEQIQREQNGYLAEADNSDEGWQEAFSKAGRKSSTSRRPNLAKINTNFMNVSQTS
KYRSKHTNFTSPRTNTGESAVTKKFIKTGSSPNTTQTSGSDKPTNPKVNPSSPASNDQTV
KHSPVISSISVKEAGKLFSYKEVAIAAPGSIVKAVADQLPKGNSPVSIAQMTTEEAKKDK
DEVHVSNNEQKTAIDDKDKPEVEMVIEVESVEKTEKGIESAVVENLDPKVEISKISADSP
CDLEPISALVQADTNGIVADEDEKTPSTEGVTLTETAKEVTKRLSAAAPPFNPSNNPVFG
LVTMSLKDHGGGILPPPVNIPTMVTINPVRRTPHQSATARVPYGPRLAGVYNKSVNRVQR
NKPILYSGGELVADGGHLSPPKVMNPHAAEFVPAQPWVSNGYPIAPNGYLVTSSGYPISP
NGYHPITTTNGFLAGQNGYPVYPVDSIESPVSSLDSPSILTQEAGAETSSESVDENESVV
EKTCEETQSAIDEKPIRTRTVVEEIQSEIKEMATEIDSQSSEVVSMSKSSMSATDRKPIN
GEAEMVEVRS
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaaagctagtagaggaaaacctcacaaggctaagagcgagaagaagaagaaa
gaagagaaagcattaccaacggttgtagaaatcacaatagaaacgcccgatgggtctgga
ctgatgcttaaggggatatcaacggacaaaattttagacgttcggaagctgttagcggta
cacgtggagacatgccatgtcaccaactactctttatcccatgaggtgcgaggtcgaagg
ctgaaagatacagtcgaaatcgtctctttaaagccttgtcacttaacggtggttgaagag
gattatacggaagattccgccgtcgcacatgtcagacaactgctagatattgtggcttgc
accaccgcgttcggtggttcatttaactctcctaagaacaccaacgtttccgttcgttct
ggttcgattgccaaagaatcaggatccggcgatggtcaggataagaagtcgtccaagaga
gatgtctcgatcggtttcgatccgtcagacgcagcggagatttatcctccgccgaggctt
ggacagttctatgactttttctccttttctcatctcactcctcccatccaatacattagg
agatcgggtcgaccgttccttgaagataaaacagatgatgatttcttccaaattgatgtg
cgagtttcaggtgggaagccgatgacaatcgttgcctcgagaaaagggttctatgcagct
ggaaaatgtgctcttttaagtcattctttggttggtttattgcagcagatgagccggatc
tttgatggtgcatacaaagctcttatgaaaactttcattgagcacaataaatttggaaat
ctcccttacgggtttcaatcgaacacgtgggttgtacctccaattgttgctgacaaccca
tctgttttcccaccacttcctgtggaagatcaaaattggggaggaaatggtggtggacaa
ggaggagatggtaaacatgatcgtaggcaatgggcaaaagaattttctattttagcagca
atgccttgtagaacagcagaagagagacaagttagagataggaaagcttttctacttcac
agtctatttgtcgacgtatcggtgctaaaatccgttgcagccattaagcaacttactcat
agtagcaagtcatcctcaaatggtttgcttgattcattttcgcatgaggataaaattgga
gatctgcttatcagggttacaagagatgtgcctgatgctagcacaaagctggatgctaaa
attgacgggagtcgtgttctaggattgtcaccagaggagcttgctaaaagaaacttgctt
aaaggcataactgcagacgagagtgcaacggttcatgatacatctactttaggcgttgtg
gttgttagacactgtggttatactgctgttgtgaaagttgcagctgaggtaaactgggat
ggaaaacccattccacaagacgttgatgtcgaggaccaacctgaagggggtgcccatgct
ttgaatgtcaatagtttaagaatgttattgcacaagtcatcaacaacgacactatcatct
attgcagctcaacgagtacaagttgcagatgttgaagatatgcactctgctaatattgtg
gtcaggaaagtgttggaggaaagtctgcagaaaatacaggcagaagtctctaaagccaca
aaatctatcagatgggaacttggagcatgttgggtgcaacatttacaaagccaggattct
gggaagcctgactataaaaaagctgaagaagctaaggtagaaccggatgtgaagggtcta
ggaaaaggattgctaaagggaatcaagaaaaagtctgaggataagatcaacaaaacggag
gaggaggtttctacaagcaacaacactgacatgatcaataaattagataaccatggcaaa
gaagagacgataaaaatggatgaagaaaaggaaatgttgtggagaaagctgcttcctgaa
gcagcatatatgcaccttaaagaatcagacactggtcttcaccttaagtcacctgatgag
ttaattgagatggcacacaaattctatgacgaaactgcccttccaaagttggtagctgat
tttggttcccttgaactttcacctgttgatgggaggacactgacagatttcatgcacacg
aggggcttgcgtatgtgctccttggggcgagtggttgaactcgcagataaactccctcat
gtgcagtcactctgtatccacgagatggttgttcgagcttacaaacacatcttacaagca
gttatagcagcagttgacgatatagctgatttggctgggtcaatagcatcctgtttaaat
atattgctaggaacgccaaatacaagtaatgtagattcggtaactagcaatgccgatgag
ttaaaatggaaatgggttgaatccttcatgtcgaagagatttgcatgtcaacagaagaat
gaatttcatcgcactcttcgtaaatttgccattcttcgagggctttgccacaaggttggg
cttgagcttgttcctagagactacgatatggattcagcataccctttcaagaaggcagat
attataagcatggttcctgtatataagcatgttgcatgctcctctgctgacggacgtaca
cttctggagtcatccaaaacatcgttggataaaggcaagcttgaagatgctgtcaactat
ggaacaaaggcactttcaaaacttgtatctgtctgtggtccttaccatcgaatgacggca
ggtgcatatagtcttttggctgtggtgctctatcatactggtgatttcaatcaggctact
atctatcaacaaaaagctttggatatcaacgagagggaacttggactcgatcatccagat
acaatgaagagttatggggacttagctgttttctactatcgtctccaacacacagagttg
gctctgaagtatgtgaatcgtgcattgtatcttttgcatttaacatgtggtccttctcac
ccgaatactgccgccacctacatcaatgtagcaatgatggaagaaggtttaggaaatgtt
catgttgctcttagataccttcatgaggctctcaagtgtaataaaaggctccttggagct
gatcacatacaaactgctgctagctatcatgccatagcaattgctctttccttgatggaa
gcatactccctgagcgttcaacatgaacaaaccactctgcagattctgcaggctaaactt
ggacatgaagatcttcgtactcaggatgcaactgcatggcttgaatacttcgagtccaaa
gctctggaacagcaagaagctgcacgcaatggtataccgaagcctgatgcctctatatct
agcaaaggacatttgagtgtatcagacttgctagattatatagccccagatgcagatatg
aaagcacgagacgtccaaaagaaacaagctcgtgcaaaggtgattaaaggaaaagcagga
caacaggaagaactgttaagtgatgaacttcaagaagatgaagttctatcaccaagccga
gagaattctagcgataaagagaacaaatttgaattgcgaaatgcacagtctgttaagaaa
accaacttggttcaacctgagcagatccaaagggaacaaaatggttatttggcagaagcc
gacaattctgatgaaggatggcaggaagctttctctaaagcaggtcgtaaatcttcaact
tctaggaggccaaatctggcaaaaataaacacgaatttcatgaatgtctctcagacatca
aagtaccgatcgaagcacaccaatttcacttccccaagaacaaatactggagagtctgct
gtcactaagaaattcatcaagactggaagctctcccaacactacacaaacatctggttca
gacaaacctaccaacccaaaggtgaatccatccagtccagcatcaaatgatcagacagtg
aagcattctccagttataagttcgatcagtgttaaagaagctggcaagcttttttcttac
aaggaagttgcaatagctgcacctggtagcattgtgaaggctgtggctgatcaattgccc
aaaggaaattctccggtgagcatagctcaaatgacaacagaggaagcaaagaaagataaa
gatgaagttcatgtgtccaataatgaacagaaaaccgccattgatgataaggacaagcca
gaagtcgaaatggtgatagaagtagaaagtgttgagaagacagagaaaggaatagaatcg
gcagtggttgagaatcttgatccaaaagttgaaatttcaaaaatatcagcagatagtcct
tgtgatttagagccaatttctgcattggttcaagctgacacgaatggaattgtggcagat
gaagatgaaaaaacaccaagcactgaaggtgttactctaaccgaaactgcaaaagaggtg
accaagagactttctgcagcagctcctccatttaatccatccaacaatccagtttttggt
ttggtcacaatgtctttgaaagatcatggaggagggatattacccccacctgtaaacata
cctacaatggtcacaataaaccctgttcgtagaactccccatcaatcagcaacagccagg
gttccatatggtccacgtctcgcaggtgtgtataacaaatccgtgaatcgagtccaacgt
aacaagcccattttgtacagtggtggtgaacttgttgcagatggtggtcatctaagccct
ccaaaagttatgaacccacatgcagctgagtttgttccagctcaaccatgggtttctaat
gggtatccgattgctcctaacggttatctggtgacatccagtggatatcctatttctcca
aatggttatcaccctatcaccaccacaaacgggtttctagctggtcaaaatgggtaccct
gtatatcctgttgactcaattgagtccccagttagctcattagattctccatcaattctc
actcaagaagctggtgctgaaacctcaagtgaatctgtggatgagaacgagtcggttgtg
gaaaaaacttgcgaagaaactcagtctgcaattgatgaaaaacctattagaactagaaca
gttgtggaagaaattcaatctgaaatcaaagaaatggctactgaaatagatagccaatca
tcagaggttgtttctatgagcaaaagctctatgagtgctacagacagaaagccaatcaat
ggtgaggctgagatggtcgaggttagaagttaa
DBGET
integrated database retrieval system
