Cynara cardunculus var. scolymus (artichoke): 112506813
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Entry
112506813 CDS
T05604
Name
(RefSeq) replication protein A 32 kDa subunit B
KO
K10739
replication factor A2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03030
DNA replication
ccav03420
Nucleotide excision repair
ccav03430
Mismatch repair
ccav03440
Homologous recombination
ccav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112506813
03420 Nucleotide excision repair
112506813
03430 Mismatch repair
112506813
03440 Homologous recombination
112506813
03460 Fanconi anemia pathway
112506813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccav03032
]
112506813
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112506813
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
112506813
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
112506813
MMR (mismatch excision repair)
112506813
DSBR (double strand breaks repair)
HR (homologous recombination)
112506813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
TrmB
MarR_2
Spc29
HTH_24
TFIIE_alpha
Motif
Other DBs
NCBI-GeneID:
112506813
NCBI-ProteinID:
XP_024966861
LinkDB
All DBs
Position
LG 2:9456878..9461566
Genome browser
AA seq
277 aa
AA seq
DB search
MYASQFDGAAAFSGGGFMPSQATQTADPSPSVFSKNRDTQTLVPLTVKQISKALLSNDDK
VNFLIDGVDVNNVKLVGMIFNKAERVTDISFVLDDGTGRIDCNRWVHEPVDTKEMEAMVD
GMYVRVHGQLKGFQGKKQLVVFGIKPLTDFDEITHHFVECIYVHSYNTKLTKLQPSSSNQ
AHMPSSAVSTQSYQTAPSNQFTGQYVADGLRGIDKMVLDYLQLPGSLARESGVHQEELVK
QLGIPLDKILVALNGLVDEGLVYSSIDDCHFKSTGNA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaagccagttcgacggcgccgccgccttctcgggcggtggttttatgccgtct
caggctactcagactgcagacccttcaccctctgtgtttagtaagaatcgcgatacacag
acgctggttcccttgactgtgaagcaaattagcaaagcgttgttgtcaaacgacgataaa
gtgaattttctcatcgatggcgttgatgtgaacaatgttaagttggtggggatgatattc
aacaaggctgagagggttactgatatttcttttgtgcttgatgatggcactggtcgtatt
gactgcaacagatgggtacatgaaccggtagacacaaaggagatggaagcgatggtggat
ggaatgtatgttcgagttcatggccaactgaaaggctttcaagggaaaaagcagttagtg
gtttttggtatcaagcccctgactgattttgatgagatcacacatcactttgttgaatgt
atatatgtccactcttacaacacaaagttaacgaagctacaacccagtagcagtaatcaa
gctcatatgccaagttcagctgttagcacacaatcataccaaactgccccatcaaatcaa
ttcactggtcagtatgttgctgacggactgaggggtattgataaaatggtcttggattat
ttgcagctgcctggtagtttagcaagggaatcaggggtacatcaagaagagcttgttaaa
caactggggatcccattggacaagatattggtggcgcttaacggtctggtagacgagggg
ctggtttactcatcaatcgacgattgtcacttcaagtccactggcaatgcctga
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