Cynara cardunculus var. scolymus (artichoke): 112506883
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Entry
112506883 CDS
T05604
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03440
Homologous recombination
ccav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112506883
03460 Fanconi anemia pathway
112506883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccav03032
]
112506883
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112506883
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112506883
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112506883
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
112506883
Bloom's syndrome complex (BTR)
112506883
FA (Fanconi anemia) pathway
112506883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-GeneID:
112506883
NCBI-ProteinID:
XP_024966965
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All DBs
Position
LG 2:complement(4047860..4053305)
Genome browser
AA seq
718 aa
AA seq
DB search
MKKGLLPVKNICGKEKKFSGKEALVKLLRWHFGHSDFRGKQLEAIEAVLSGRDCFCLMPT
GGGKSICYQIPALAKPGIVLVVSPLIALMENQVMALKEKGVAAEYLSSTQTSQVRNKIHG
DLESGNPAMRLLYVTPELIATTGFMAKLTKVHARGLLNLIAIDEAHCISTWGHDFRPSYR
KLASLRKRLPDIPMLALTATAVPKVQVDVIESLNMENPLVLKSSFNRPNIYYEVRFKDLL
SDPYVDLTDLIKSCGDVCGIVYCLERATCDDLASHLSKNGISCAAYHAGLNNKLRSSVLD
DWISAKTQVVVATVAFGMGIDRKDVRIVCHFNIPKSMVSFYQESGRAGRDQQPSRSVLYY
GIDDRKKMQFILNNAESKKLQSSSLQDVSPKKSVAEFNSMVEYCETSGCRRKKILDSFGE
QVSSSLCKKTCDACKDPNLVEKYLEELKTMCSLRNRNGSSQIYMNSSSKSIGEVEFSEFW
SRDDEVIVSEDDISDDDDDINIVEGLPSKSKISEKIELLQKAEEKYYQKDKQSNKLDKNA
ISEMTRESCKQRLLNAVKQMQQRLHNLPIDPETSSMFFENECYKKYGKTGKSFYLSQVAS
TVRWLSTATAADLTSRLAATHQSPASKNATEVEPSSSISPPVSDQATKMRKEKDDGNFKS
GDPSSPSLSTCNDIKLPPIPSFSEFINKKGSKDGKPSKLKRESPYGVNKQPDKRSRLQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagggactactgcctgtgaaaaatatttgtggcaaggagaagaaattttctggg
aaagaagctttggtcaagctcttgagatggcattttgggcattcagattttcgaggaaag
caactggaagccatagaagctgttttatcaggaagagattgtttttgtttgatgccaact
ggtggtggaaagtccatttgttatcaaatccctgcactagcaaaaccaggcattgtgctt
gttgtttctcctttaatagccttaatggaaaaccaagttatggcattgaaggaaaaaggg
gttgctgctgagtatctctcttcaactcagacttcacaagttaggaataagatccatgga
gaccttgaatctggaaatccagcaatgaggttgctctatgtgacaccagaattaattgca
actacaggatttatggcgaagctgaccaaagttcatgcaagagggttgttaaatctgatt
gcaatagatgaggcacattgcatctcgacatggggccatgattttagacctagctaccga
aaattagcttccttgaggaagcgactgccggacattccgatgttagcactgacagctact
gctgttcccaaggttcaggtggatgtgatagagtccttgaacatggagaaccctctagtc
ctgaaatcatcatttaatcgcccaaatatatattacgaagttcgatttaaagaccttctt
agcgacccatatgttgatctgactgatctaattaaatcttgcggagatgtctgtgggatt
gtctactgccttgaacgtgcaacatgcgatgatctggcttctcatttatcaaaaaatggc
atttcttgtgctgcatatcatgcggggttgaacaataaactgcggagttctgtattggat
gattggatttctgccaagacacaagttgtagtggctacagtggcttttgggatgggtata
gaccggaaggatgttaggattgtttgccatttcaatattcccaagtcaatggtatccttt
tatcaagaatcaggtagagctggtcgcgatcaacagccctctagaagtgttttgtactac
ggaatcgatgaccgcaagaaaatgcaatttatattgaataatgcggagagcaagaagttg
caatcctcaagtttgcaggacgtctccccaaagaagtcagttgctgaattcaattcgatg
gttgagtattgcgaaacatctggttgtcgtaggaaaaagattcttgacagttttggggaa
caggtatcatcatcactgtgtaagaaaacatgtgatgcatgcaaagatccaaacctagtg
gagaagtacttggaggagcttaagaccatgtgttctcttcgtaatagaaatggatcctca
cagatatatatgaacagctcctcaaagtcgattggtgaagtagaattctcagaattctgg
tctcgtgatgatgaagtgattgtgtctgaggacgatatatctgatgacgatgatgatata
aatattgtggaaggcttgccttccaaatccaaaattagtgagaagatcgagttgttgcaa
aaagcagaagagaaatattatcagaaggataaacagagcaataaactcgataaaaatgcc
ataagtgaaatgacgagggagtcctgcaagcaaagattgctcaatgcagtaaagcaaatg
cagcagcggctccacaacttgccaatagaccctgaaacatcttccatgttcttcgagaat
gaatgctacaaaaaatacgggaaaactgggaaatcgttttatttatcacaagtggcaagt
actgtgaggtggctttctactgctaccgcggcagacctaacatcccgacttgccgccacc
caccagagtcctgcttcaaaaaatgcaacagaagtagaaccttcctcttcaatatcaccg
cctgtctcagatcaggcaacaaagatgaggaaggaaaaagatgatggaaattttaaatcg
ggagacccttcaagtccttcactgagcacttgcaatgatataaagttgccgccaatccca
tctttctccgaatttatcaacaaaaaaggaagcaaagatggcaaaccatcaaaattgaaa
agagaatcaccatatggagttaataagcaaccggataaaagaagcagacttcagtag
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