Cynara cardunculus var. scolymus (artichoke): 112506903
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Entry
112506903 CDS
T05604
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112506903
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112506903
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112506903
03036 Chromosome and associated proteins [BR:
ccav03036
]
112506903
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112506903
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112506903
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112506903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Dynactin_p22
Motif
Other DBs
NCBI-GeneID:
112506903
NCBI-ProteinID:
XP_024966997
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All DBs
Position
LG 2:complement(65221958..65224977)
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AA seq
537 aa
AA seq
DB search
MIKQILNKLPRKPSSKSSHNDEGNNAMDSAAINSTGMGVNGGSKSNSSSGRSSNLSSSKL
NDEASKKLGTLGATQVVQALNHASYEALPSFRVVSSSEKHNLFIKKLNMCCVVFDFSDPS
KNSKEKDVKKQTLLELVDYVSSVTSKFNEVTMQEMTKMVAANLFRSLPNANHDNKLPDLY
DQEDDEFSMDPSWPHLQVVYEFLLRFVASSETDAKLAKRYIDHAFVLKLLDLFDSEDQRE
REYLKTILHRIYGKFMVHRPFIRKAINNIFYLFIFETGKHNGIAELLEILGSIINGFALP
LKEEHKQFLVHALIPLHKPRCLSTYHQQLLYCVGQFVEKDFRLADTVIRGLLKYWPVTNS
SKEVMYLSELEEILEATQAAEFERCMVPLFRQIGYCLNSSHFQVAERALFLWNNEHIRNL
ITQNRKVILPIIFSPLEKNTRGHWNQAVQSLTFNVRKIFSDADESLFEECLVRYQQDEAK
QKESLAKRQSTWSRLDTIAAAKALSIESVVISRFASSVTMTAAAAATTTTTTTTAIS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaaatactaaataagcttcctaggaagccatcttcgaaatcctcacacaat
gatgaagggaacaatgcaatggattctgctgctataaattcgactggtatgggtgttaat
ggcggttctaagagcaattcatcgtctggtagaagctccaatttgagttcgtctaaattg
aatgatgaagctagtaagaaattaggtactcttggggcgacccaggtggtgcaggcattg
aatcatgcttcttatgaagcattgcctagttttcgagttgtatctagttcagaaaaacac
aatctattcatcaagaagttgaatatgtgttgtgtagtgtttgattttagcgatccgtcc
aagaattccaaagagaaagatgttaagaaacagacattgctcgagctcgttgattatgtt
tcatcggttacctcaaaattcaacgaggttacaatgcaagaaatgacgaaaatggtggct
gctaatttgtttcgatctttgccaaatgctaatcacgataacaagcttccggatttatat
gatcaagaagatgatgaatttagtatggatccatcatggccacatcttcaagttgtctat
gaattccttcttaggtttgtagcttcatcagaaacagatgctaaacttgccaaaagatat
atcgatcatgctttcgtgttgaaattgcttgatctctttgattccgaagatcagagagaa
agggagtatttgaagacaatcctgcatcgtatatatggaaagttcatggttcatcgtccg
ttcatcaggaaagcgatcaacaacatcttctatctcttcatttttgaaactgggaagcac
aatgggatagctgaattgcttgagattttgggtagtataattaatgggtttgctttgcct
ctgaaggaagaacataagcaatttcttgttcatgctttgatcccactccacaagcccaga
tgtttgtcgacataccatcagcaactcttgtattgtgttggtcagtttgtcgagaaagat
ttcaggctggcggatacggtgattagaggattactgaaatattggcccgtaactaatagt
tcgaaagaggtgatgtatcttagtgaattggaggagattcttgaagctacacaggctgcg
gaatttgaacggtgcatggtccctttgttccgtcagatcggatactgcctcaatagttcg
catttccaggtggcagaacgtgcattatttctatggaataacgagcatataaggaatcta
ataactcaaaaccgcaaagtgattctgcccattatcttctcacctttggagaagaacaca
cgaggtcactggaaccaagccgttcagagcctaacgtttaatgtccggaagatattttca
gacgctgacgaatcgctatttgaagagtgcctagtgaggtaccaacaagatgaagccaag
cagaaggaaagcctcgcaaagcgacagtcaacctggagccgcctggataccatagctgcc
gctaaagctttgagcatcgagtctgtggtcatctcaaggtttgcctcgtctgtcaccatg
accgccgccgccgccgccaccaccaccaccaccaccaccaccgctatttcatga
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