Cynara cardunculus var. scolymus (artichoke): 112506982
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Entry
112506982 CDS
T05604
Name
(RefSeq) nuclear pore complex protein NUP93A isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112506982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112506982
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112506982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
112506982
NCBI-ProteinID:
XP_024967118
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Position
LG 2:complement(4689545..4701406)
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AA seq
863 aa
AA seq
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MTSDADMSSWTDLLHSSSKLVEQAAPSAQFPSLQRNLDQLEALSKKLKSKTLRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAVQEA
QKDNLRNFGDYMMTVLEDDWQKEKRDFLHSLSRISTLPRTNVDDSGFGANRSGPILSLTS
SPHVSSGPSSMELVPIADKPAIDKKAAAYAEVVRNLNDARQRGLAYKPATAFKSAYESLG
LDSSGGKSVTMNKIWHLIQTLMGENSSVQRNVSKKMLLIIGARRHLEWGHEKYIVEMIQS
HPAQAALGGVVGNLQRIHAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGYY
DDARDVASRSRVSHQFASQLAEWITNGGMVSVETASIAAEECEKMLRMGDRVGRGTFDKK
KLLLYALISGSRRQIDRLLREQPTLFNTIEDFLWFKLCAVRDCSGGSSSVVLNEGLSPYS
LDDLQAYLNKFEPSYYTKNGKDPLVFPYVLLLSIQLVPAILYLSKDIGDEGYNIDAAHIA
IVMADHGVLSDIAGAGHKLGVMDAFAEAASIIRQYGSLYLRHNNLSMALEYYAQAAATVG
GGQLSWSGRGNVDQQRQRTFMMQQLLMELLLRDGGILLLLGPRGAGEEGELGRFLNDRKE
RHQFLLEAARQCLEAGLNDKSIEIQKRVGAFSAALDTINKGLSEAICSLSRGRLDGESRT
TGLVHSGNELLETFKYYPDVSLQERDHVLEQETVLRQLETILSIHKLARQEHHLDALREV
AKLPFLPFDPRAPDTPTDLFQNSSPYVQACVPDLLKVSLQCIDNVRDSDGSLRALRTKIA
NFLANNLNRNWPRDLYERVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgatgcagatatgagtagctggaccgatcttttacattcatcttcgaagctc
gtcgaacaagctgctccttctgctcagtttccgtctctccagagaaatttggaccaatta
gaagcgttgtcaaagaagctcaagtcgaaaacgctaagaactgaggctccctctcaatca
attgctgctacaaggctgcttgcacgtgaggggataaatgctgagcaattggcacgagat
cttaaatcttttgaattgaagacaacttttgaggatgttttcccagctgaggctacaagc
gttgaggaatatttgcagcaggttcatgaaatggcaatggtctcagctgttcaggaagct
cagaaagataatctcagaaattttggtgactacatgatgacagttttagaggatgactgg
caaaaggaaaaaagggatttccttcacagtctgagccgcatttccacgttaccaaggacc
aatgtagatgattcagggttcggggctaaccgttcagggccaatattatctctaacatct
agtcctcatgtttcatccggtccttctagcatggaacttgtgccaatagctgataagcca
gccattgataaaaaggctgcagcatatgctgaggttgtgaggaatctcaatgatgccaga
cagcgtggtttagcatataaaccagctactgctttcaagagtgcatatgaaagtcttggc
ctggattcttctggtggtaaatctgttaccatgaacaagatttggcatctaattcagact
ttgatgggtgagaattcaagtgttcagagaaatgtttcaaagaaaatgttgctaataatt
ggtgcaaggcgtcatttagagtggggtcatgagaagtatatcgtggaaatgatacaaagt
catcccgcacaggctgctcttggtggagtggttggaaatttgcagcggatccatgctttt
cttaggatccgtttgagagactacggggttcttgattttgatgctggcgatgctcgtagg
cagcctcctgtagataccacgtggcagcagatctatttctgcttgagaactgggtactat
gacgatgcgagggatgttgcttcacgctcccgtgtttctcaccaatttgcttcacagctt
gcagaatggatcacaaatggaggcatggtatctgtggagactgcttctattgctgcagag
gaatgtgaaaaaatgttaaggatgggtgatcgagtgggccgaggtacatttgacaagaaa
aaattacttttatatgcactcatatctggctcccgtaggcagattgatcgcctgctcaga
gagcagcctacgcttttcaatacaatagaggattttctgtggttcaagctgtgtgctgtt
cgagactgttctggtggatcgagttctgttgttttaaacgagggactatcaccctacagc
ttggatgatttacaggcttatctaaacaaattcgaaccatcttattatacaaagaacggg
aaggaccctctagtatttccatatgtgttgctgttgagcatacagttggttccagccatc
ctatatttgtccaaggatattggagacgagggatataacatagatgctgcccatatagca
attgtgatggcagaccacggcgtcctctctgacattgccggggcaggtcataaattaggg
gtgatggatgcttttgctgaggcagctagcatcattagacagtatggttcactgtatttg
cgacacaataatctttccatggcattggagtactatgcacaagctgctgctacagtgggt
ggtggacagttatcttggtctgggagaggaaatgtagatcagcaacggcaacggacattc
atgatgcagcagctcctcatggagctattgctacgtgatggtgggattcttttgttactt
gggccaagaggggcaggagaagaaggcgaactaggacggtttttgaatgatcgaaaagag
aggcaccagtttctgcttgaagctgctcgccagtgtctggaagccgggcttaatgacaaa
tctatagagatacagaagagagttggggcattttcagcagcgctggataccataaacaag
ggactctctgaagctatctgctctttatcacgtggtagattggatggtgagagccggaca
accgggcttgttcattctggaaacgagctgctggagacatttaaatactacccggatgtc
agtctccaagagagagatcatgtgttagagcaagaaactgtgctaagacagctcgagaca
attttgtctattcataaattggcaaggcaagaacatcatctagatgctctaagggaggtc
gccaagcttccatttcttccatttgatccccgagcgcctgatacgccaacagatttgttc
caaaattcgtctccttatgtccaagcttgtgttccggaccttcttaaggtttctcttcag
tgtatagacaacgtcagagattcggatgggtcacttcgtgcattaagaaccaagattgcc
aatttccttgcgaacaatttgaatcgcaactggccacgtgacttgtatgaaagagtcgct
cgcagcttgtga
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