Cynara cardunculus var. scolymus (artichoke): 112506993
Help
Entry
112506993 CDS
T05604
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112506993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112506993
Spliceosome [BR:
ccav03041
]
Common components
Common spliceosomal components
SR proteins
112506993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
112506993
NCBI-ProteinID:
XP_024967137
LinkDB
All DBs
Position
LG 2:602224..609040
Genome browser
AA seq
297 aa
AA seq
DB search
MSRSSRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDA
IRGRDGYDFDGHRLRVELAHGGRGNSSSTDRYSSHGGGRGGSGGGRGGGVSRRSDYRVMI
TGLPSSASWQDLKDHMRRAGDVCFSQVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFRN
AFSRGVIRVKEYDSSHSRSRSRSRSKSRGYSKSRSRSRSKSPKVKSSRRSRSHSRSGSPR
SRSGSKPRSLSRSPSRSRSPLPSRPKRVSKSPKRRSPSKSRSPSRSRSRSRSKSLSR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctctagcagaacgctatatgttggtaatcttcctggggatattcgtgagcga
gaagtggaggatttattttacaagtatggtccaatagctcacattgatttgaaaattcca
ccaagacctccaggttatgcctttgttgagtttgaggaggctcgtgatgctgaagatgct
attcgtggtcgcgatggctacgattttgacgggcacagattaagggtggaacttgctcat
ggtggtcgtggtaactcatcttctacggatcgttatagcagtcatggaggtggtcgtggt
gggagtggtggtggtcggggtgggggagtttctagacgctcagattacagagttatgatt
actgggttaccttcttctgcatcatggcaagaccttaaggatcacatgcgccgggctgga
gatgtttgtttctcccaagtttttagggagggtggtggcaccacagggattgtggactac
acaaactatgacgacatgaaatatgccataaggaaattggacgattccgaatttcggaat
gctttctcccgtggagttatacgtgtgaaggaatatgattcaagccattctaggagccgc
agccgcagtcggagcaaaagcaggggctatagcaagagtcgcagcagaagtcggagcaag
tccccaaaagtgaaatcttctcgtcgctcaagatctcattcgaggtctggctctccccgt
tctcgttctggatctaaaccgcgctctttatcaagatctccttcaagatccagatctcct
ctaccatctcgtccaaagcgggttagtaaaagcccgaaaagacgcagtcctagcaagagc
aggagcccaagcagaagcaggagtcgtagcaggagcaagagtttatctcggtga
DBGET
integrated database retrieval system
