Cynara cardunculus var. scolymus (artichoke): 112507004
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Entry
112507004 CDS
T05604
Name
(RefSeq) isoamylase 1, chloroplastic-like
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500
Starch and sucrose metabolism
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112507004
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
112507004
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GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
GHL10
hDGE_amylase
Motif
Other DBs
NCBI-GeneID:
112507004
NCBI-ProteinID:
XP_024967150
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Position
LG 2:8323660..8335223
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AA seq
492 aa
AA seq
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MDASSMEKLLPCASYSSIHTPKLTSTHNFEFLNPKVQIKWPTRRNHNALVVNASDGGVGG
EVDTAVVEKEKPKALPPRFQVLQGSPTPFGATAKKDGVNFAIYSRNATSATLCLMTPSDL
PEKRVTEQIPLDQLTNKTGDVWHVFLKGDFTDMLYGYKFSGEFCLEEGHYYDSSQILLDP
YAKAVVSRGEFGVLGPDDDCWSQMACKIPTIHEFDWEGDLPLAFPQRDLVIYEMHVRGFT
RHESSQTGSPGTYLGVVDKLDHLKELGVNCIELMPCHEFNELEYFSYNPVLGDYRLNYWG
YSTINYFSPMSRYASAGASNCGLDAINEFKQLIKEAHKRGIEVLMDVVFNHTAEGNENGP
ILSFRGVDNSVFYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDSLRYWVTEMHVDGFRF
DLASILTRGSSLWDAANVYGNQLEDDLLTTGSPLSSPPLVDMISNDPILRGVKPVNYIMN
QLCSLFHDISNS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttcttcgatggaaaaactacttccatgtgcctcatactcttcgattcacaca
ccgaaactcacttctacgcacaattttgaattcctaaaccccaaggtacaaatcaaatgg
ccaacccggaggaatcacaatgccttggtggttaatgcaagcgatggaggtgtaggagga
gaagtggatacggccgtggtggaaaaggagaagccgaaagcattgccgcctcggtttcag
gtgttacagggttctccgacgccgtttggtgccacagcgaaaaaagatggggtcaatttt
gcaatatattcacgcaatgccacatctgcgactctatgcttgatgactccctctgatttg
cctgagaaaagagttactgagcagatacctctggatcaacttaccaataagactggagat
gtctggcatgtgtttctgaaaggagattttacagacatgctatatggctacaaattttct
ggagagttttgtcttgaggaaggacactactatgattcttctcagatcttattagatcct
tatgctaaagctgttgtaagcaggggggagtttggtgttttaggacctgatgatgattgc
tggagccaaatggcatgcaaaattcctaccattcatgagtttgactgggaaggagatcta
cctcttgcattcccacaaagagatctggtaatttatgaaatgcatgttcgtggatttaca
aggcacgagtccagccagacaggatctcctggcacttaccttggtgtagtagacaaactt
gatcatttgaaggaacttggtgtgaactgcatagagttgatgccttgccatgagttcaat
gagctggagtacttcagctacaatcctgtcttgggtgactataggttaaattattggggg
tattcgactatcaactatttttcaccaatgtcgagatatgcatctgctggtgctagtaat
tgtggccttgatgcaataaatgagttcaaacagcttattaaagaggcacacaaacgtgga
atcgaggtactcatggatgtggttttcaatcacactgctgaagggaatgagaatggtccc
atattgtcttttcgaggtgttgataacagcgtcttttatatgcttgcacctaagggggag
ttttacaactattcaggttgtggaaacaccttcaattgcaaccatcctgtcgtacgccaa
ttcatagtagattccttgagatattgggtaacggagatgcatgtcgatggatttcggttt
gatcttgcttctatcctgacaagaggcagcagcctctgggatgcagcaaatgtatatggg
aatcaattagaagatgatttgctgacaactggatcacctctcagcagcccaccattggtt
gacatgattagcaatgacccaatacttcgaggagtgaagcctgttaattatatcatgaac
caattatgctcgttatttcatgacatttccaacagctaa
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