Cynara cardunculus var. scolymus (artichoke): 112507007
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Entry
112507007 CDS
T05604
Name
(RefSeq) auxin efflux carrier component 2 isoform X1
KO
K13947
auxin efflux carrier family protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112507007
Transporters [BR:
ccav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
112507007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mem_trans
Motif
Other DBs
NCBI-GeneID:
112507007
NCBI-ProteinID:
XP_024967152
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All DBs
Position
LG 2:complement(9091504..9095019)
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AA seq
637 aa
AA seq
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MITGKDIYDVLAAIVPLYVAMMLAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS
SNNPYKMNYHFIAADSLQKLVILSALFVWQWLSKTGSLEWMITLFSLSTLPNTLVMGIPL
LKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFHVESD
VVSLNGREPLQTDAEIGDDGKLHVVVRRSSTASSRSVISSYNKSHNITGITPRASNLTGV
EIYSVQSSRGPTPRASSFNQSDFYAMFSKAGSPKHGYTSSFGGGDVFSMQSSKGPTPRTS
NFEEEMLRIGKKRTGGRSMSGELFTNNMNGNNNGLVCSYPPPIPNPTFSLGSTSAAGGSG
APKKKEGGVGGGSGGAPPPNNSKELHMFVWSSSASPVSEGNMKHAVNKAAAEFGAIDPSR
VVPPQENASPMTKTYGEQKEVDIDEPKLQINGSPFKKLGTEEAENKNHRMPPASVMTRLI
LIMVWRKLIRNPNTYSSLLGLIWSLVSFRWDIKMPTIVSGSISILSDAGLGMAMFSLGLF
MALQPKLIACGQRVATFSMAVRFLTGPAVMAATSIAIGLRGVLLHVAIVQAALPQGIVPF
VFAKEYNVHADILSTAVIFGMLIALPITILYYVLLGV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccggaaaggacatttacgatgttctcgctgccatcgtaccactctacgttgcc
atgatgcttgcctatggctccgtccggtggtggaaaatcttcacccccgatcagtgctcc
ggcattaaccgtttcgtcgccgtttttgccgtcccacttctttctttccatttcatctct
tccaataatccttacaagatgaactaccactttatcgctgctgattcccttcaaaaactc
gtcatcctatctgctttattcgtatggcaatggctgagtaagactggaagtctcgaatgg
atgatcactttgttctccctctcgaccctcccgaacactttggtcatgggaatcccattg
ctcaaagccatgtatggcgatttctctggatctcttatggtccagatcgtcgtgttgcag
agtgtcatctggtacaccctcatgctcttcatgttcgagtatcgaggagcaaagcttctc
ataaccgaacaattcccagaaactgctggttctatcacgtctttccatgtcgaatctgac
gttgtctcgttaaacggccgtgagcctttacagaccgacgccgagatcggagacgacggc
aagcttcacgtggtggttcggagatcttccactgcctcttcacgatctgtgatctcttct
tacaacaagtctcataacatcaccggaataacgccaagggcatcaaatctcaccggagta
gagatctattccgttcagtcttccagagggccaacacccagagcttcaagcttcaaccaa
tcggacttctacgccatgttcagtaaagccggtagccctaaacacgggtacaccagtagt
ttcggaggtggcgatgtcttctcgatgcaatcgtcgaaaggtccgacaccaagaacctcg
aatttcgaagaagaaatgttgaggatagggaagaaaagaacaggagggaggagtatgagt
ggggagttattcactaacaacatgaatggtaataacaatggtttagtttgctcttaccca
cctccaattccaaaccctaccttttcattagggtctactagtgccgccggcggcagcggt
gctccaaagaagaaagaaggtggtgttggtggtggcagtggcggtgcaccaccgcccaac
aacagtaaagagcttcacatgtttgtatggagctcaagtgcatctcctgtttctgaaggt
aacatgaaacatgcagttaataaggctgctgctgaatttggagccattgatccttccagg
gttgtacctccacaagaaaatgcaagtccgatgacgaaaacatacggagaacagaaagag
gtagatatagacgaaccgaaactacaaataaacggatccccgttcaagaaactaggaacg
gaagaggccgaaaacaagaaccaccggatgccgccggctagcgtcatgacgaggctcatc
ctcataatggtttggcgaaaacttattcgtaaccccaacacatactcgagtcttttggga
ctcatttggtctctagtttcgttcagatgggacattaaaatgccaacaattgtaagtgga
tcgatctcaattttatcggatgcagggttggggatggctatgtttagcctagggttattt
atggcattacaaccaaaactaatcgcatgtggtcaacgtgtggcgacattctcaatggcg
gtgaggttcttaactggcccagcagtcatggcggctacttccatcgccatcggtcttcgt
ggtgttctccttcatgttgctatcgttcaggcggctttgcctcaaggaatcgtgccgttc
gtcttcgcaaaggagtacaatgtccatgctgatattctgagcaccgcggttatttttgga
atgttgatagctttgcccataaccatactttactatgtgctactaggggtgtaa
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