Cynara cardunculus var. scolymus (artichoke): 112507099
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Entry
112507099 CDS
T05604
Name
(RefSeq) polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM isoform X1
KO
K11462
polycomb protein EED
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112507099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112507099
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
112507099
PRC2.2
112507099
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
112507099
NCBI-ProteinID:
XP_024967288
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Position
LG 2:complement(65725475..65730452)
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AA seq
382 aa
AA seq
DB search
MTKITLGCEPAVGSLAPSKKRDYRVTNRLQEGKRPIYAVVFNFIDSRYYNVFATVGGNRV
TVYQCLEGGVIAVLQSYIDEDKDESFYTVSWACDADGTPLLVAGGINGIIRVIDAGNEKI
HKSFVGHGDSVNEIRTQALRPSLVLSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSV
DFHPSDIYRIASCGMDNTVKIWSMKEFWTYVERSFTWEELPSQFPTKYVQFPVLIASIHT
NYVDCIRWLGDFILSKVNDCLIQSVDNEFILWEPKMKEQSPGEGTVDILQKYPVPECDIW
FIKLSCDFHYNTAAIGLYNSGNREGKIFVWELQTSPPSLIARLSHVQSKSPIRQTAMSFD
GSTILSCCEDGTIWRWDTVATS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagataacgttagggtgtgaaccagcggtgggatcattagccccttccaagaag
agggattacagagtcaccaaccgtctacaggaaggcaaacgtccaatttatgctgtggtt
ttcaacttcatcgactctcgttattacaacgtctttgccaccgttggtggtaaccgagtt
actgtataccaatgccttgaaggtggcgttattgctgtattgcagtcttacattgatgaa
gataaggacgagtctttctacactgtgagctgggcatgtgatgctgatgggacaccattg
ctagtcgctggaggaattaatggtataatccgtgtcattgatgctggcaatgagaagata
cacaagagtttcgttggtcatggggactcggtaaacgaaattagaacacaagcactaaga
ccttctcttgtgctttctgcaagcaaagatgaatctgttcgcttgtggaatgttcaaact
ggaatatgcattttgatatttgccggagctggtggtcatcgaaatgaagtgctaagcgtg
gattttcatccttcagacatatatcgtattgccagttgtggtatggataacactgtaaag
atctggtcgatgaaagagttttggacgtatgttgagaggtcttttacatgggaggaactt
ccttcacaatttcctacaaaatatgtgcaatttccggtattgattgcttcaatccataca
aattatgtcgactgcattaggtggcttggtgatttcatactatccaaggtgaatgactgc
ctcatacagagcgttgataatgagttcatattgtgggagccaaagatgaaagagcagtct
ccaggagagggaacagtagatatccttcagaaatatccggttcccgagtgtgacatttgg
tttataaagctttcatgtgatttccattacaatacagcagctataggcttatataattca
ggcaacagagaagggaaaatatttgtatgggaattgcagactagccccccttctctcatt
gcaaggttatctcatgtccagtccaaatctcccatcaggcaaactgccatgtcgtttgac
ggaagcacaatactcagttgctgtgaagacggaaccatttggcgttgggatacagtcgca
acctcatag
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