Cynara cardunculus var. scolymus (artichoke): 112507121
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Entry
112507121 CDS
T05604
Name
(RefSeq) U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
KO
K12846
U4/U6.U5 tri-snRNP-associated protein 3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112507121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112507121
Spliceosome [BR:
ccav03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
112507121
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNRNP27
Motif
Other DBs
NCBI-GeneID:
112507121
NCBI-ProteinID:
XP_024967325
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All DBs
Position
LG 2:complement(9485890..9489254)
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AA seq
206 aa
AA seq
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MGDRRDRDRDRKRDRDDRDRLRHRHVDHDRERDRDRERDRDRDRKDRSKRSYTPDRARSR
HTRSRTRSPDHHRSRSRSTDRHRRRSHHRTPSPDQSRKRRKHGDEDGQRAASVVSEFVDG
IVKEKQQQKNSKDAEMVEDDAGGEMDANEIEMMKMMGIPVGFDSTKGKPVEGNDVSGIRA
VTKRQPRQYMNRRGGFNRPLPAEVNR
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcggcgggacagagacagggaccggaagcgagatcgagacgaccgggatcgt
ctccggcaccggcacgtcgaccatgaccgggaacgagaccgggatagagagcgggaccgg
gaccgggaccgtaaagacaggagcaaaaggtcgtacacgccagaccgagctcgttctcgc
cacactaggtctcggactcgctccccggaccaccaccgatcgcgttctcgatccacggac
aggcaccgtaggagaagccaccaccgtaccccgtctccggaccaatcgcggaagcgtcgc
aagcacggggatgaagatggccagcgtgctgcctctgtcgtttcggagtttgtggatgga
attgtgaaggagaaacagcagcagaagaattctaaggacgcagaaatggttgaagatgat
gctggtggtgagatggatgccaatgaaatagagatgatgaagatgatgggaattccggtt
gggttcgattcaactaaagggaagccagtcgaagggaatgatgtgagcgggatcagagcg
gtgactaaaagacagccacgccagtacatgaaccgccgtggtgggttcaatcgcccattg
cctgctgaagtaaaccgttga
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