Cynara cardunculus var. scolymus (artichoke): 112507127
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Entry
112507127 CDS
T05604
Name
(RefSeq) myosin-17-like
KO
K10357
myosin V
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112507127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112507127
04131 Membrane trafficking [BR:
ccav04131
]
112507127
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112507127
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112507127
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112507127
mRNA cycle factors
P-body specific factors
112507127
Membrane trafficking [BR:
ccav04131
]
Others
Actin-binding proteins
Myosins
112507127
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112507127
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112507127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
CbiA
Motif
Other DBs
NCBI-GeneID:
112507127
NCBI-ProteinID:
XP_024967331
LinkDB
All DBs
Position
LG 2:3843831..3859557
Genome browser
AA seq
1531 aa
AA seq
DB search
MAAPVNIIVGSHVWVEDPALAWIDGEVVRINGQELHVNTTDGKTVIRNFSKVFPKDTEAP
AGGVDDMTRLSYLHEPGVLQNLSTRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY
KGAAFGELSPHVFAVADVAYREMIKEGKSNSILVSGESGAGKTETTKMLMRYLAHLGGRT
GVEGRTVEQQVLQSNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLE
RSRVCQISNPERNYHCFYLLCAAPPEDREKFKLESPQSYHYLNQSKSYELEGVNDAHEYI
ATRRAMDILGISGEEQEAIFRVVAAILHLGNIEFAKGHEIDSSVIKDEKSRFHLNITAEL
LMCDAKSLEDALIKRVMVTPEEVITMILDPEAALGSRDALAKTIYSRLFDWIVEKLNSSI
GQDPNSKSLIGVLDIYGFESFKHNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAIN
WSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFAKNKRFIKPKL
SRTSFTISHYAGEVNYLADQFLDKNKDYVVAEHQSLLTASKYPFVVGLFPPLPEASSKSS
KFSSIGTRFKLQLHSLMETLSSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLLRFGVLAPDVLDGNYDEKIACQMILDKMGLKGYQIGKTKVFLR
AGQMAELDTRRVVVLGDAAKVIQRQIRTYIARKEYILIREAAIQLQSCWRGLSASKQLDK
LRREAAAVKIQKDFRCFVASKSYLTLRMCVITLQTGLRATTARDEFRYRKQTKAATFIQV
HFRRYSAYSYYMSLRKAAIVTQCGWRQRVARKELRILKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRSELEQTKIQETAKLQDALRMMQIQIDEANAKVIEEREAAQKAIEDAPP
VVKQTPVIVQDTEKVDTLTAEIKSLKALLLNQKQTAEEARKSYIEADARNAELIRKLEDA
EKRADQLQESTRRLEEKLSNIESENQVLRQQALIMSPTGKSIPPRPRTTFFQRTLENGNI
QNGEARPTTPEMSIVLSNTREPELEEKPQKSLNEKQQENQDLLIKCISQDLGLHGGKPVA
ACVIYKCLLHWRSFEVDRTTVFDRIIETIASAIEVHDNNDVLGYWLCNTSTLLTLLQHTL
KASEAASMTPQRRRSSASLFGRMSSQGLRASPQSGGLPYLSGQILGRLDDLRQVEAKYPA
LLFKQQLTAFLEKIYGLIRDNLKKEISPLIGSCIQVPRTSRASLVKGRSQAKGVAQQAVN
AHWQSIVKSLDSCLKIMKANYVPSFLVRNIFTQIFSFINVQLFNSLLLRRECCSFSNGEY
VKSGLAELEQWCFYATEEYAGSAWDELKHIRQAVGFLVIHQKPRKTLKEITNELCPVLSI
QQLYRISTMYWDDKYGTHSVSSDIISKMRVMMTEDSNNSVSTSFLLDDDSSIPFSVDDIS
KSMPRVEIADIEPPLLIRENSGFVFLHQRKE
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccggttaatattattgtaggttcacatgtatgggttgaggatcctgcttta
gcatggattgatggcgaagtagtccgaattaatggtcaggagcttcatgttaataccaca
gatgggaagacggttatcagaaacttctcaaaagtttttcccaaagatactgaagcccct
gcaggtggtgtagatgacatgaccaggctttcatatttgcatgaaccaggagtgctgcaa
aacttgtctaccagatatgagcttaatgaaatatatacatataccgggaacattctaatt
gcgataaatccgtttcaaagattacctcatctctatgatacacatatgatggagcaatat
aaaggggcagcatttggagaacttagccctcatgtttttgcagttgcagatgttgcatac
agggagatgatcaaggaaggaaaaagcaactcaattttggtcagtggagaaagtggtgct
ggtaagactgaaacaacaaagatgctcatgagatatctcgcacatttaggtggtcgtacc
ggagtagaaggtcggacagttgaacaacaagtcctgcaatccaatccagtactcgaagca
tttggcaacgcaaaaactgttaggaacaacaattcaagtcgttttgggaagtttgtcgag
atacagtttgataagagtgggaggatatcaggggcagccatcagaacttatcttcttgag
agatctcgtgtttgtcagatatcaaatcctgaaagaaactaccattgcttttatcttctt
tgtgcggcaccacctgaggacagagagaagtttaaacttgaaagccctcagtcatatcat
tacttaaatcagtcaaaatcatacgagcttgagggagtaaatgatgctcatgaatatatt
gctacaagaagggccatggatattctcggaatcagtggagaagaacaggaggcaatattc
agggtagtggctgcaattcttcatcttggtaacatcgagtttgcaaagggacatgaaatt
gactcttcggtcattaaagatgagaagtctaggttccatctgaatataacagctgaattg
cttatgtgtgatgctaagagcttagaggatgcattgatcaagcgtgtaatggtgacacct
gaggaagttattacaatgattcttgatcctgaagctgcactgggtagtagggatgctttg
gctaaaacaatctactctcgcttgtttgactggattgtggagaaactaaacagctcaatc
ggacaagatccaaactcaaaatcactaattggcgttcttgacatatatgggtttgagagt
tttaagcacaacagttttgagcagttctgcatcaattttacaaatgaaaaactacaacaa
cactttaaccagcatgtgtttaaaatggaacaagaagagtacacaaaggaagcaataaat
tggagctacatagagtttgttgataaccaagatgttttggatcttattgaaaagaaacct
ggagggatcatttcacttctagatgaagcatgcatgttccccaagtctactcatgaaact
tttgctcaaaagctataccagacatttgcaaagaacaagcgcttcatcaaacccaagctt
tctcgcactagttttaccatatctcattatgctggggaggtgaattatttagctgatcag
tttctagacaaaaacaaggattatgtggtggcagaacatcaaagcttgttaactgcctca
aagtatccatttgttgttggtctatttcctccacttcctgaagcatcgtccaaatcatcc
aaattttcctccattggtacacggtttaagctacagcttcattctctaatggaaaccttg
agttcaactgaacctcactacattagatgtgtgaagccaaacaacgttctcaagcctgct
atctttgagaacctaaacatcatccaacaactgcgctgtggtggtgttctggaggcgatc
aggataagttgtgctggttatcctaccaggcgaacattttacgaatttcttcttcgtttt
ggtgttctagctcctgatgttttggatggaaactatgatgagaagatagcatgccagatg
attctggataaaatgggattgaaaggttaccagattggtaaaacaaaggtgtttctacga
gcaggtcaaatggctgaactcgatacaaggagagtagtggttcttggggatgcagctaag
gttattcaaaggcaaattcgcacctatattgcccgcaaggaatatatcttaatacgcgaa
gctgctatccagttgcagtcgtgttggcgaggcctatcagctagcaagcaacttgataaa
ctgcgaagagaagctgctgcggtcaagattcagaaggatttccggtgttttgttgctagc
aaatcgtatctaacacttaggatgtgtgtcatcacattgcagacagggttgagagcaacg
actgctcgtgatgagtttagataccgaaaacaaactaaggctgcaactttcatacaggtt
cacttccgtcgctatagtgcatattcttactacatgagtctccggaaggctgcaatagtt
actcaatgtggttggaggcaaagagttgccaggaaagagcttcggattctcaaaatggca
gcaagggagacaggggccctcaaagaggcaaaagacaaactagaaaagcgtgtggaagaa
cttacatggcgtttgcagctggaaaagagactaagaagtgaattggaacagacgaaaata
caggaaactgcaaagctgcaggatgcattgcgtatgatgcaaatccaaatagatgaagca
aatgctaaagtaattgaagagcgtgaagcagcacagaaagctattgaagatgctcctcca
gtggttaagcaaacaccggttatagttcaggatacagaaaaggttgacaccttgacagca
gagatcaaaagtttaaaggctttgctgctaaaccaaaaacagacggctgaagaggcgagg
aagtcttacatagaagctgatgccaggaatgcggagctaataagaaaacttgaagatgca
gaaaaaagagcagaccagcttcaggaatccacacggaggcttgaagagaagctctccaat
atagagtcggagaatcaagtacttcgccaacaagcactgatcatgtcacctactggaaaa
tccatacctccacggccaaggacaactttttttcagagaacactggagaatgggaacatc
caaaatggcgaagcaaggcctactacacctgaaatgtcgattgttctatcaaatacgagg
gaacctgaattagaggagaagccacaaaagtctcttaacgaaaagcaacaagagaaccag
gatctacttatcaagtgtatttcacaagatctaggattacacggcggcaaacctgttgct
gcttgtgttatatacaagtgccttttgcactggaggtcatttgaagttgaccgaacaact
gtatttgatcgcataatcgaaaccattgcttccgccatagaggtccacgataataatgat
gttttaggctactggttgtgcaatacatccacattgttgacgctgcttcaacacaccctt
aaagcaagtgaagcagctagtatgactccacaaaggcggaggtcatcagcctctcttttt
ggaaggatgtcctcccaggggttacgagcatctcctcagagtggtggccttccatatctt
agtggccaaattcttggtagactggatgatttacgacaggtggaggccaaatatcctgct
ttgttgttcaagcagcaacttacagcatttcttgaaaagatatatggattaatacgggat
aatctgaagaaagaaatatctccgttaataggatcatgcatccaggttcctaggacatca
cgtgcaagtttggtgaaagggcgatcccaagctaaaggtgtggctcagcaagcggtgaat
gctcattggcaaagcattgtaaaaagcttagatagttgcttgaagataatgaaagcaaac
tatgtgccctctttcttggtgcgcaatatattcacacaaatattctcatttatcaatgtt
cagctattcaacagccttctattgcgacgtgaatgctgctcattcagcaacggggaatac
gtgaagtcaggattagctgaattagaacaatggtgtttttatgcaacagaggaatatgca
ggctcagcttgggatgagttaaagcatatcagacaggcagtcggattcttggttatacat
cagaagcccaggaaaacgttgaaagaaataaccaatgaactttgtcctgtgctcagcata
cagcagctataccgaattagtacgatgtattgggatgacaaatacggtacacacagtgta
tcttcagatatcatttccaaaatgagagttatgatgacggaggactcaaacaattctgtt
agcacttcatttttgctagatgatgattccagcatcccattctctgtggatgatatctcc
aagtcaatgccacgagtagaaatagccgacattgaacctccactgttgattcgtgaaaac
tcgggtttcgtattcttgcatcaacggaaagagtga
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integrated database retrieval system
