Cynara cardunculus var. scolymus (artichoke): 112507209
Help
Entry
112507209 CDS
T05604
Name
(RefSeq) protein argonaute 10 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112507209
03036 Chromosome and associated proteins [BR:
ccav03036
]
112507209
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112507209
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112507209
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112507209
microRNA pathway
RISC loading complex
112507209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
112507209
NCBI-ProteinID:
XP_024967440
LinkDB
All DBs
Position
LG_2
Genome browser
AA seq
986 aa
AA seq
DB search
MPTRQIKEGVEQHLVIKPKPKPKSNLQNQINPVADVVQKTPKTAQSDENHHHQPPKTRGR
RRGRGGRKSCDQDTETGIFMRPNSRPCTVAASQRPANLLQSHFNESDKKMSNLNESEMGF
PSSSKSLSFAPRPGYGQTGTVCIVKANHFMTQLPDKDLNQYDVSILPEVTSITLNRAIIA
ELVKRYKESDLGMRLPAYDGRKCLFTAGELPFVWKEFRIKLVDEEDGIDSPKREREYKVV
IRFVARVNLHHLGQFLAGKRADGPQEALQILDIVLRELSTKRYCPVGRSFFSPDIRKPQQ
LGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEALPVIDFVAQLLGKDVLSRPLSDSD
HVKIKKALRGVKIEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNANMKSVVEYFQEMYG
FTIQLTHLPCLQVGNQRKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPKDREN
DILQTVQQNSYNQDPYAKEFGIRISEKLASIEARVLPAPWLKYHDTGKEKDCLPQVGQWN
MMNKKVINGMTVSRWACINFSRSVKESIARGFCNELAQMCQESGMEFNPDPVIPIYSTKP
EHVEKALRHVYHMSMNKLKGNELELLLIILPDNNGSLYGDIKRICETDLGLISQCCLTKY
VFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSS
PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFR
KATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTR
LFANNHRVRNTTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN
NFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYVEPEVQENGSLVGQGT
KGSRESGGVRPLPALKDNVKRVMFYC
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgaggcaaatcaaggaaggagtggaacaacacctagtgatcaaaccaaaaccc
aaacccaaatcaaacttgcagaatcagataaacccagtagcagatgtagttcaaaaaacc
cccaaaacagctcaaagtgatgaaaatcatcatcatcagccacccaaaactcgaggaagg
agaagaggaagaggtggccgcaaatcctgtgatcaagatactgaaactggcatctttatg
cgtcccaattcaaggccatgtacagttgccgcttcccagaggcctgcaaatctactacag
tcccattttaatgaaagtgacaaaaaaatgtccaatttgaatgaatcagaaatggggttt
ccttcttcaagcaagtccttgagttttgctcctaggcctggctatggtcaaactgggaca
gtatgtattgtgaaggctaaccatttcatgacacagttaccagataaggacttgaaccag
tatgatgtcagcatacttcctgaagtaacatcaataactttgaacagagctatcatcgca
gagctggtgaaacgatataaggaatctgacttggggatgagattgcctgcttatgatggc
agaaagtgtttatttactgctggtgaactaccttttgtctggaaggagttcaggatcaaa
ctggtagatgaagaggatggaatcgatagtcccaaaagagagagggagtataaagtggtg
atcagatttgtggcacgcgtcaatttgcatcatttaggccaatttctagccggtaagcgt
gcggatggtccacaagaagcccttcaaattttagacatagtgttgagagagctatcaaca
aaaaggtactgtcctgttggaagatccttcttttctcctgatattcggaaaccacagcag
ctcggagaaggcctggagtcatggtgtggattctaccagagtattagacctactcagatg
ggcttatctttaaatattgatatggcttcagcggcttttattgaggctctcccagtaatc
gattttgtagcccagcttcttggcaaagatgtgttatcaaggccgttgtctgattcggac
catgtaaagataaaaaaggctcttcgaggagtgaaaattgaagtgactcacagagggaat
gtacgaagaaaatatcgggtttctggattaacatcacagcccacgagagaattagtattc
cctgttgatgacaatgcaaacatgaagtccgttgttgagtactttcaagaaatgtatggc
ttcactattcagctaactcatctcccttgccttcaagtaggaaaccaaaggaaagccaac
tatttaccaatggaggcctgcaagattgttgaagggcaacggtacacaaaaaggttgaat
gagaaacaaattactgctctgttgaaagttacctgccagagacccaaggatcgtgaaaat
gatattttgcagacggttcagcagaattcatacaaccaagatccatatgcaaaggaattt
ggtataagaattagtgaaaagttagcatccatagaggcaagagttctccctgctccttgg
ctaaaatatcatgataccgggaaggaaaaggattgtttacctcaagttggtcagtggaac
atgatgaacaagaaagtgattaacgggatgaccgttagccggtgggcttgcataaacttc
tctaggagtgtcaaagaaagcattgctcgtggattctgtaatgaactggctcaaatgtgt
caagaatctggcatggaattcaatcctgatccggtgataccaatttattcaacaaagcct
gagcatgttgagaaagcattaagacatgtctatcatatgtcaatgaacaagctaaaagga
aatgaactggaacttctattaattattttgccagataataatgggtccttatatggtgat
ataaagcgcatctgtgaaacggatctcggcttaatctctcaatgctgtcttacaaaatac
gtattcaagattagcaagcaatacttggctaatgtgtccttgaagatcaatgttaagatg
ggtggtagaaacactgttcttttggatgctataagttgcagaataccattagtgagtgac
ataccgactattatatttggagcagatgtcactcacccagaaaacggagaagactcaagc
ccctcgatagctgccgtagtagcttctcaagattggcctgaagtcacaaaatatgccgga
ttggtttgcgctcaagctcatagacaggagcttattcaagacttgtacaaaacttggcaa
gatcctgttcgtggaactgtcagtggcggcatgatcagggatcttctggtttccttccga
aaggcaactgggcagaagccgctaaggatcatattttacagggatggtgtgagtgaagga
caattttatcaagtcttactctatgaattagatgctattcgtaaggcttgtgcatcttta
gaaccaaattatcaaccacccgtcacttttgttgtcgttcaaaaacgtcatcatacacga
ttgtttgcaaacaatcatagggttcggaacaccacagacaagagtggaaatattttgcca
ggtaccgttgtcgataccaaaatctgtcatccgacggaatttgatttttatctttgcagc
catgctggtattcaggggacgagtcgacctgctcattaccatgttctgtgggacgagaac
aatttcaccgctgatggaattcaatcattgacaaacaatctctgttatacatatgcaagg
tgtacacgttcagtatctgttgttccaccagcatattatgcccatttagctgcttttcgg
gcaaggttttacgtggaaccagaagtgcaggaaaatggtagccttgttggtcaaggaaca
aagggaagtcgcgagtctggtggtgtacgaccgttgcctgccctcaaggacaatgttaaa
agagtaatgttttattgttaa
DBGET
integrated database retrieval system
