Cynara cardunculus var. scolymus (artichoke): 112507211
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Entry
112507211 CDS
T05604
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112507211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112507211
03032 DNA replication proteins [BR:
ccav03032
]
112507211
Spliceosome [BR:
ccav03041
]
Complex A
U1 snRNP components
Sm proteins
112507211
U2 snRNP components
112507211
Complex B
U1 snRNP components
112507211
U4/U6.U5 tri-snRNP components
112507211
Complex C
U2 snRNP components
112507211
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112507211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
Gemin7
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
112507211
NCBI-ProteinID:
XP_024967445
LinkDB
All DBs
Position
LG 2
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPVGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaagttgaacaacgaaacagtctcgatcgagctcaag
aatgggacggttgtacatggaaccatcacaggtgttgatattagcatgaacacacacttg
aagacggtgaagttgacactgaaggggaaaaaccccgtaaccctagatcatttgagcgtg
agaggcaacaacattcgttactatatacttcccgacagcttgaatctggagaccttgcta
gttgaagaaacacctcgagtcaagcccaagaagccaactgcagggaggcctgtgggacgt
ggacggggaagagggcgaggtcgtggacgtgggcgtggtcgttaa
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