Cynara cardunculus var. scolymus (artichoke): 112507267
Help
Entry
112507267 CDS
T05604
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00531
Glycosaminoglycan degradation
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112507267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccav00536
]
112507267
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
112507267
Glycosaminoglycan binding proteins [BR:
ccav00536
]
Heparan sulfate / Heparin
Enzymes
112507267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
112507267
NCBI-ProteinID:
XP_024967541
LinkDB
All DBs
Position
LG 2:complement(11441849..11446397)
Genome browser
AA seq
547 aa
AA seq
DB search
MGSLCWQIGICIWVFLFGFIWVFQDSNIENGAVSIDGESGIAEIDTDFICATMDWWPPEK
CDYGTCSWDNASLLNVDLSNKIFQNAVKAFSPLKIRLGGSLQDVLVYETEDHIKPCTPFT
QNTSALFGFNEGCLPLSRWDELNSFFNETGAEIIFGLNALTGREVLADGSTVGPWDSTNA
ESLMRYTVKKNYSMYAWELGNELSGSGVGARVTASQYAIDTTLLKNVVHEIYDGIEPKPR
IISPGGFFDAKWFKEFINKTNEILDVVTHHIYNLGPGVDQGLVEKILDPSYLDGEADTFK
QLKNILATSETSASAWVGEAGGAYNSGHNLVTNAFVFSFWYLDQLGMSAVYDTKTYCRQS
LIGGNYGLLNTTTFEPNPDYYSALLWHQLMGKTVLATNFSGTKKMRSYAHCAKKSDGITL
LLINLDTTTTVNVTLTINSLLKSWGHDNHLRQPHTRKGIRMVRQDTKTGESAIREEYHLT
AKDGNLHSQTMVLNGKELTVNEAGDIPPLEPLNVSISEPITVTPNSIVFAHIPSLTLNAC
GNVAMEL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttgtgctggcaaattggtatctgcatttgggttttcttgttcggtttcatc
tgggtttttcaggattcaaacatcgaaaacggggctgtttccatcgatggtgaaagtggg
attgcggagatagatacagatttcatctgtgctaccatggattggtggccacctgagaag
tgcgattacggtacttgtagctgggataatgcttctcttctcaatgtggatcttagcaac
aaaatttttcagaatgcagtcaaagccttttcaccattaaagattagattgggagggagt
ttacaggacgtacttgtctatgaaaccgaagatcacataaaaccctgcacccccttcact
caaaacacctctgcattgtttggttttaatgagggctgtctacctctgtcccgctgggat
gaactaaacagcttctttaatgaaaccggggctgaaataatttttggattgaatgctctt
actggaagggaagtgctagctgatggttcgactgttggaccttgggactccaccaatgct
gaatctctgatgcgttatacggttaaaaagaattacagcatgtatgcttgggaactcggg
aacgagttaagtggaagcggagttggagcgagagtaacagcatctcaatacgccattgac
acaaccctcctcaagaacgtagtacacgagatctatgacggcattgagcctaagccacgt
attatctcaccaggaggcttttttgatgcaaaatggttcaaggagttcataaacaaaaca
aatgaaatcctcgatgtggtcactcatcatatatacaatcttggcccaggagttgatcaa
ggcctagtcgaaaagattcttgatccgtcttatcttgatggcgaggctgatacttttaag
caactcaagaacatcctcgcgacctccgaaacttcggcatctgcttgggttggtgaggct
ggtggagcttacaatagtggccacaatcttgtgacaaatgcatttgtgtttagtttctgg
tacttggatcagctaggaatgtcagctgtttatgacacgaagacgtactgcagacagtca
ttaataggtgggaattatggcttactcaacaccactacttttgagccgaatccggattat
tacagtgctcttctttggcaccaactaatggggaaaacggttctcgccacaaacttttcg
gggaccaagaaaatgcgctcttacgcacactgcgctaaaaaatctgacggaataacgctt
ctactcatcaatctagacaccaccaccaccgttaatgtaacattaacgattaatagctta
cttaaatcttggggacatgataatcatctgcgacaaccgcatacgagaaagggaatccgg
atggttagacaagatacaaagacgggtgaatcagcaatacgagaagaataccatctgaca
gcaaaagacggaaacttgcatagtcaaacgatggtgcttaatgggaaagagctgactgtg
aacgaggcaggtgatatacctccattggagccactaaacgttagtatatcagaaccgata
accgtaactcccaattctattgtatttgcccacatcccatcacttactttgaatgcttgt
ggcaatgtggccatggagttgtaa
DBGET
integrated database retrieval system
