Cynara cardunculus var. scolymus (artichoke): 112507292
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Entry
112507292 CDS
T05604
Name
(RefSeq) neutral ceramidase 2-like
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00600
Sphingolipid metabolism
ccav01100
Metabolic pathways
Module
ccav_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112507292
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
112507292
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
112507292
NCBI-ProteinID:
XP_024967586
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Position
LG 2:7590283..7596997
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AA seq
763 aa
AA seq
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MEFFRALIQRQRAIAWFWVLLLVFAHNGKKTISASNYLVGLGSYDITGPAADVNMMGYAN
SDQTASGIHFRLRARSFIVAEPQGNRVVFVNLDACMASQLVTIKVLERLKARYGNLYTEK
NVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVDGIEQSIMRAHENLRAGSVYVN
KGEILDAGVNRSPSSYLNNPAAERSKYKYDVDKEITLLKFVDDQWGPVGAFNWFATHGTS
MSRTNELISGDNKGTAARLMEDWFDQKSVGGIANEIPRRVSNIVPGTQGNHHELLELASS
FHSASGKPVTRYLSIAGRVRSSLRSADRPKFVSAFCQSNCGDVSPNVLGAFCTDTGLPCD
FNHSTCGGKNELCYGRGPGYPDEFESTRIIGERQFKKATELFNSASQKLNGKIDFRHTYL
DFSQLEVTLPKQGGGSETVKTCPAAMGFAFAAGTTDGPGAFDFKQGDDSGNAFWKLVRNV
LKTPSKEQTDCQQPKPILLDTGEMKQPYDWAPSILPIQILKIGQLVILSVPGEFTTMAGR
RLRDAVGAVFKEKVQVVIAGLTNTYSQYVTTLEEYKMQRYEGASTLYGPHTLSAYIQEFT
KLATAIVSGKPVEAGPQPPDLLNKQISLLAPVVVDSTPLGVGFGDVSTNIPRNSTFKKGD
TVSVVFWSACPRNDLMTEGTFALVELLQGQDTWVPAYDDDDICLRFKWSRPSKLSAQSHA
TIEWRVPQSAVPGVYRVSHFGASKSLFGSISHFTGSSNAFVVK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggagttctttcgagctctcatccagcgacagcgtgcaattgcatggttttgggtgtta
ttactagtttttgcacataacgggaaaaagaccatctcagcttccaattatttggttggg
cttggaagctatgatattacagggcctgcagctgatgtcaacatgatgggatatgccaac
tcagatcaaactgcatccggcattcactttcgattgcgagcacgttcatttattgtggcg
gagccacagggaaaccgtgtggtatttgtaaatcttgatgcctgcatggcctcacaactt
gtaacaatcaaagtcctagaaaggttgaaggcaaggtacggaaatttatatacagaaaag
aatgttgcgattagtggtatacatacccatgcaggccctggaggttatttgcagtatgta
gtgtatattgttacatctctgggattcgtgcggcagtcgtttgatgtaatagttgatggc
attgagcaaagcatcatgcgtgctcatgaaaaccttcgtgctggatcagtatatgtgaac
aaaggagagatcttagacgctggtgtcaatcgcagccctagctcttatcttaataatcct
gcagcagaacgctccaagtacaaatatgatgtggataaagaaataactcttttgaagttt
gtagatgatcaatggggcccagtaggtgcttttaactggtttgccactcatggaacttca
atgagtcgtacaaatgagttgatcagtggggacaataaaggaactgctgcacgcctcatg
gaagattggttcgatcagaaaagtgttggaggaattgctaatgaaatcccacgcagagtc
tccaacattgttccgggtacccaaggaaaccaccatgagttgctcgaacttgcctcttct
tttcactctgcttcaggtaaaccagtaaccaggtacttgagcatagcaggacgggttagg
agttctcttaggtctgcagataggcccaaatttgtatccgcattttgccaatctaattgt
ggtgatgtgagcccaaatgtgcttggagcattctgcacagatactgggctaccctgtgac
tttaatcatagtacttgtggtgggaagaatgagttatgttatggccgaggaccaggctac
ccagatgaatttgaaagcacacgtattattggagagagacaattcaaaaaagctactgaa
cttttcaacagtgcttctcagaagttgaatggaaagattgattttcgtcacacttatttg
gacttctcacaacttgaggttacgcttcctaaacaaggaggagggagtgagactgttaaa
acatgccctgctgcaatgggatttgcatttgcggctggtaccactgatggacctggggct
tttgactttaagcaaggagacgactctgggaatgcattttggaagttggtgcggaatgtg
ctcaaaaccccaagtaaggagcaaacagactgtcaacagccaaaacctatcctgcttgat
actggggaaatgaagcaaccatatgactgggcgccatcaattctcccaattcaaatacta
aagatagggcagttggtgattctcagtgttcctggagaattcacaactatggccgggagg
cgtctccgtgatgctgttggtgctgtttttaaagaaaaggtccaggttgtgatagcaggt
ctgactaatacctactctcaatatgttactacccttgaggagtacaagatgcaaagatac
gagggagcttcgactctttacggtccacatactctcagtgcctacattcaggagttcaca
aagctcgctacagccattgtctctggaaagcctgtcgaagcaggtccacaaccaccggat
ctattaaacaagcagataagcctgctagcacctgtggtggtggactccaccccattgggt
gtcggctttggggatgtcagtactaacatccctcgtaattccactttcaagaaaggtgac
actgtgagcgttgttttttggtcggcatgtcctcgaaatgatctcatgaccgaaggcacg
ttcgctctagtggagttgcttcagggacaagacacgtgggtcccggcctacgatgacgat
gatatctgccttcgtttcaagtggtcaaggccttcgaaactcagtgctcagagtcatgcc
actatagaatggcgagtcccacaatcggcggtgcccggggtttaccgagtgagtcatttt
ggtgcatcgaagagtctgttcggatcgattagccattttacggggtcatcaaatgctttt
gtggtcaaataa
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