Cynara cardunculus var. scolymus (artichoke): 112507314
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Entry
112507314 CDS
T05604
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03060
Protein export
ccav04141
Protein processing in endoplasmic reticulum
ccav04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
112507314
04141 Protein processing in endoplasmic reticulum
112507314
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112507314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112507314
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccav02044
]
112507314
Membrane trafficking [BR:
ccav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
112507314
Secretion system [BR:
ccav02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
112507314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
112507314
NCBI-ProteinID:
XP_024967615
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All DBs
Position
LG 2:complement(10092455..10098101)
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AA seq
545 aa
AA seq
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MLLTGRQIASSWSLSCNLPTQSRTSIHTSRNLRNNSSICRATLSVHGKSNALLSLSSSST
SCESSNFDPLGINSGKLSGLNSAWESVLGLFAETFDSTSGTRNDKSSSAKGAAAAIEDTS
IDFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSILSTLDTFSGG
GIGRLGICSLGIVPFINASIVFQLLTQIYPKLQELQKREGEAGRKKILQYTRYASVGFAV
VQAIGQALFLRPYVDDFSSQWVLSSVILLTLGSVLTTYIGERITDLKLGNGTSLLIFTSI
ISYLPASFGRTVAEAFQDGNYLGLLAIIFSFFLLVLSIVYVQEAERKIPINYASRYSSKA
GGLQKSAYLPFKVNSSGVMPIIFSTSSLALPATLARFTGLNVLKNAAIGLNPGGAFYLPT
NILLIGFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSVF
LAVLAAGPAVVEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYEID
KDMTF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgttgctaacaggaagacaaattgcatcttcatggtctctttcttgcaacttaccaact
caatctcgcacttcaattcatacgtctagaaatcttcgaaacaattcatccatttgcaga
gctacactttctgtccacggaaaatccaacgctctcttatcattatcttcatcctccacc
agctgtgagagctctaattttgatccgctaggtatcaattcaggtaaattatcaggtctg
aattccgcgtgggaaagtgttttaggcttgtttgcagagacatttgatagtacctctggt
acaagaaacgacaaatcttcctcagctaaaggagcggcagctgcaatagaggacacttcc
attgattttggggatttcttcaaaggaccgttacccggaaaatttcttaagcttttgggg
tacttggctttatctcgacttggaatatacatacctcttggtggggtgaatcgagatgca
tttgctggaaatttggatcagaatagtatattaagtactttggatacattttccggagga
ggaataggccggcttgggatatgctcccttggtatagtcccattcattaatgcatctatc
gtgtttcaactccttacacaaatttaccccaagttacaagaacttcaaaaacgagaaggc
gaagcagggcgaaagaaaattcttcaatatactcgatatgcttctgtcggatttgctgtc
gtgcaggcaattggtcaagcactgtttcttcgtccttatgttgatgatttcagcagtcaa
tgggtcttatcttctgttattttgttaacacttggatcggtgcttacaacatatattggc
gaaagaataacagatttaaaacttggaaatggaacatcgcttctcatttttaccagcatc
atctcctacttgccagcatccttcggtagaacagttgcagaagcctttcaggatggcaac
tatctgggcctacttgctatcatcttctccttcttcctgcttgttcttagtatcgtctat
gttcaggaagccgaaagaaaaattcctataaattatgcttcgagatacagtagtaaagca
ggcgggcttcagaaatctgcttatttgccgttcaaggttaacagttcaggagttatgcca
attatattttccacgtcatcgttagctcttcctgccactctagcacggtttactggttta
aacgtgctaaaaaacgctgctattggtttgaaccccgggggtgctttctatctcccgacg
aacattttattgataggtttctttaactattactacactttcctacaattggaccctgat
gacgttagcgaacagttgaagcgtcaaggtgcctccattcccctggtacgacctgggaaa
agtacagcggcatttatcaaaacggttctgagtcggatatcagttttaggttcggtattt
ttggcagttcttgcagctgggccggctgtggtggaacaaacaacacacttgacggcattt
cgtggattcgcaggtacatcggttctgattcttgttggttgtgccacagacacggcaaga
aaagttcaagcagagataatttctcagaagtacaagaacatagagttctatgaaatagac
aaagatatgaccttctaa
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