Cynara cardunculus var. scolymus (artichoke): 112507348
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Entry
112507348 CDS
T05604
Name
(RefSeq) mitochondrial Rho GTPase 1-like
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112507348
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ccav04031
]
112507348
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
112507348
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
112507348
GTP-binding proteins [BR:
ccav04031
]
Small (monomeric) G-proteins
Rho Family
Miro
112507348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
Ras
EF_assoc_1
Roc
MMR_HSR1
Dynamin_N
EF-hand_7
SRPRB
AAA_16
ATPase_2
EF-hand_1
EF-hand_6
EF-hand_5
AIG1
Motif
Other DBs
NCBI-GeneID:
112507348
NCBI-ProteinID:
XP_024967668
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Position
LG 2:1241368..1250689
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AA seq
649 aa
AA seq
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MSGDSAAATTISSHRSAARVVVVGDQATGKSSLIATVASDTFPETISPVLPPTRLPADYF
PDGIPVTIIDTPSSLEDKPKVEEELKRADAVVITYACDQPETLTRVQTYWLPEIRRLKVK
VPVIVVGCMLDLRDEHYPINLELEMGPIMQQFREIETCLECSAANLVQVAEVFYYAQKAV
LHPTAPLFDQESQTLKPRCIRALKRIFILCDHDMDSALNDSELNEFQVRCFNVPLQPSEI
VDVKRVVQEKVPEGVNYLGITLEGFLFLHALFIEKGRLETTWTVLREFGYNDDVELEKEN
IPVPSKKAPDQCVELTREAVDFLKGIFNLFDSNHDGALQDSELDELFSTAPESPWNDAPY
KDSVETTELGDLKLSAFLCQWVLMTLLDPFQSLAYLIYVGYTGDPAKALRVTRKRSLNVK
KQQTDRHVFQCFVFGPKNAGKSALLSSFVGRPFQNKYNLTSNQCYTVNTVDQLRGVNKTL
VLHEIQEGDFKECLSNKESLAACDVAAFVYDSSAEYSLKRASELLTDVARHGEDSGYGVP
CLIIAAKDDLHSYPMAIKDSETICQAMKIDAPIRISVKEKHMNNVFHRIVNAAEQCHLGV
PETEHGRNKKHFQQLVNRSLILASVGAAVAVVALAAYRAYARRKSNSAN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgattcagcggcggcgacgaccatctccagtcaccggagtgccgctcgcgtc
gtagtagtcggtgatcaagccactggtaaatcaagcctaatcgcgacagttgcctccgat
acttttcccgaaaccatttcacctgttcttcctcccactcgtcttcctgccgactacttc
cccgatggcattcccgtcacaattattgacactccatctagtttggaagataaacctaag
gtagaggaagaattgaagcgggccgatgcagtagtcataacttatgcttgtgatcaacct
gaaacactcactcgcgttcagacttattggcttcctgaaattcggcgcctaaaggtgaag
gtaccagtgattgtggttggatgcatgctagatttgcgtgacgaacactaccctattaat
ctagagctggagatgggtccaataatgcaacaatttagggagattgagacttgtttagag
tgttctgcagctaaccttgttcaggtagctgaggtcttttattatgctcaaaaagcagtg
cttcatccaacagcccccttgtttgatcaagaatctcaaactttgaaacctcgctgcata
agagcattgaaaaggatatttattctttgtgatcatgatatggattctgcccttaatgat
agcgagttgaatgaatttcaggtaaggtgtttcaacgttcctctacaaccttctgaaata
gtggatgttaagagagtagtgcaagagaaggtacctgaaggggtcaactatcttgggatt
accctagagggatttctttttcttcatgccctatttattgaaaaaggccgccttgagact
acgtggaccgtcttacgtgaatttggttacaatgatgacgttgaactcgagaaagagaat
attcctgttccatctaagaaggctcctgaccagtgtgtcgaattgacgagggaagctgtg
gacttcttgaaagggatattcaatttgttcgattccaaccatgatggagctctacaagat
tctgagcttgatgagctgttttcaactgcaccagaaagtccatggaatgatgcgccttac
aaggattctgtggagacaactgaactaggggatctaaaactttctgcgtttctatgtcag
tgggtcctaatgacattacttgatccatttcaaagtttggcttatttgatatacgtggga
tatactggtgatcctgcaaaagcgctccgtgttactcgaaaaagatccttaaatgttaag
aagcaacagacagacagacatgttttccaatgctttgtttttggacccaaaaatgctgga
aaatctgcactgttgagctcatttgtaggaaggcctttccagaacaaatataatttaaca
agcaatcaatgttacacagtcaatactgttgaccaacttcggggagttaataagacactc
gtattacatgaaattcaagaaggtgactttaaagaatgtctatccaataaggagtcattg
gctgcctgtgatgtagcagcttttgtttatgacagttcggccgagtattctttaaaaaga
gcttcagaattgctcacggacgtagctaggcacggagaagatagtgggtatggtgtgcct
tgtctcatcattgctgctaaggacgacttacattcgtatccgatggcaatcaaagattca
gaaacgatttgtcaggcaatgaaaatagatgcacctattcgtatcagcgtgaaagaaaaa
catatgaacaatgtgttccacagaattgttaatgcagccgagcaatgtcacttgggtgtt
ccggagactgaacatgggagaaacaagaagcatttccaacagcttgtgaaccgttctctc
attcttgcttccgtaggagctgctgttgctgtagttgctttggcagcataccgagcctat
gctaggaggaaaagtaactctgccaattag
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