Cynara cardunculus var. scolymus (artichoke): 112507369
Help
Entry
112507369 CDS
T05604
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112507369
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112507369
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112507369
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112507369
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112507369
Ion channels [BR:
ccav04040
]
Chloride channels
Chloride channel (CLC)
112507369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
112507369
NCBI-ProteinID:
XP_024967701
LinkDB
All DBs
Position
LG 2:57517857..57523901
Genome browser
AA seq
771 aa
AA seq
DB search
MDGNVDIECEGVGKMERNGSAFDERGMNREPLLSKNRINTSSQIAIVGSNVCPIESLDYE
ILENDLFKQDWRSRKKVQIFQYVVLKWTLALLIGLATGLVAFFNNLGVENIAGFKFLLTS
KLMLNHKYYQAFAAFAGCNLVLAICAAVLCAYIAPAAAGSGIPEVKAYLNGIDAHSILAP
STLFVKIFGSVFGVAAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTWKWLRYFKNDRD
RRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSLIEF
CRTGKCGLFGEGGLIMFDINSSIPDYNMVDLLAVMLLGVVGGILGSLYNYLVDKVLRTYS
IVNERGPVFRVFLVVIISLLTSCCAYGVPWFAKCIPCPTGLEVDCPTAGRSGNYKNFQCP
PDHYNDLASLLLNTNDDAIRSLFSSLNANEFRIPTLLVFFTAMYILGIITYGIAIPSGLF
IPVILAGASYGRFIGKLLVSISNLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNNLL
MLPLMMLVLLISKSVADNFNKGVYDQIVRMKGLPFLEAHAEPYMRHLVAGDVVSGPLITF
SGVEKVGNIVHSLRLTTHNGFPVIDEPPFLEAPELCGIVLRSHLIVLLKGKMFTKHKCLT
GTEMLQRFHAFDFAKAGLGKGPKMEDLDIKPEEMDLYVDLHPITNTSPYTVVETMSLAKA
AVAFRELGLRHLCVVPKTPGRPPVVGILTRHDFMPQHILALYPGLDPHKKN
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaacgttgatatagaatgcgaaggagtagggaagatggagaggaatggatcg
gcgtttgatgaaagagggatgaacagagaaccgctgctttccaaaaacaggatcaatacg
tcgtcgcagattgccattgttggttccaatgtttgcccaatcgaatctcttgattacgag
attcttgaaaacgatctctttaagcaggattggaggtcaaggaagaaggtgcagatattt
caatatgttgtcttaaaatggacactagcacttcttataggattagctacgggtcttgtg
gcctttttcaacaatcttggagtggagaacattgctggtttcaagtttcttctaactagc
aagcttatgcttaatcataaatattatcaggcatttgctgcatttgctggttgtaatctg
gttcttgcaatttgcgctgcagttctttgtgcttatatcgcccctgcagcagcgggatct
ggtatacctgaagttaaagcgtatctcaatggaatagatgcacattctattcttgctcca
agtacgctcttcgtaaagatatttggatcggtttttggtgttgctgctggatttgttgtg
ggaaaggaaggaccaatggtgcacacgggggcttgcatagccagtttattgggacagggt
ggctcgcgcaagtaccatttgacgtggaaatggctcagatattttaagaacgatagggac
cgaagggacctaatcacctgtggagctgcggctggggttgcagccgcctttcgtgccccg
gttggcggagtcctctttgcgcttgaagaagcggcctcatggtggcgaagtgctcttttg
tggagaacgtttttcaccaccgcggtagtagctgtggttttgagatcgcttatagagttt
tgtagaactggaaagtgtggactatttggagaagggggtctcatcatgtttgatatcaac
agtagcataccggactataacatggtggatcttttggccgttatgttacttggagtcgtt
ggagggatcctcggaagtttatataattatctcgtggacaaggtcttgcgtacttatagc
atcgtcaatgagagaggtcctgtttttcgggtatttttggtcgttatcatttcgctcttg
acgtcttgttgtgcttacggtgttccgtggtttgcaaagtgtatcccgtgcccaaccggc
ttggaggtagattgcccgacagcaggccgatccggtaattacaaaaacttccaatgtcca
cccgatcactataacgatctcgcttcccttctactcaacactaacgatgatgccatccgc
agcctatttagttcccttaatgcaaacgaattccgtatccctacgcttctcgttttcttc
actgcaatgtacatcctcggtatcataacatatggcatcgcaattccatccggcctcttt
attccggtcattcttgccggagcatcctatggccgattcatcggaaaacttcttgtttcg
atctcgaatcttgatgtcggccttttcgctctcctcggtgcagcttcatttcttggcggc
acgatgaggatgaccgtatcgctctgtgttattcttcttgaactcacaaacaatctcttg
atgcttccgttaatgatgctcgttctcctgatttccaaatcagttgcggataatttcaac
aagggggtttacgatcagatcgtaagaatgaaaggattgccgtttctcgaagcccatgct
gaaccatacatgcgacatctggtcgcgggtgatgtcgtttctgggccattgataacgttt
tcgggtgttgagaaagttggtaacattgttcattctctaaggttaacaacgcataacggg
tttcctgttatcgacgagccacctttcttggaagcaccggaactttgtgggatcgttttg
aggtctcatttgatcgtcctgcttaaaggaaagatgttcacgaaacataaatgtttgact
ggaaccgaaatgttgcaaaggtttcatgcgtttgatttcgcgaaagcgggattagggaag
gggccaaagatggaagatttggatattaagccagaagagatggatttgtatgttgatctc
catcctattactaacacatcaccgtataccgttgtggagacgatgtcgttggccaaagct
gctgtcgcgtttagggaactaggacttcggcacttatgtgtcgtgccaaagactccgggg
aggccaccggttgttggcatcttgacgcggcatgacttcatgccacaacatattttagca
ctctacccgggcctcgacccacacaaaaaaaattga
DBGET
integrated database retrieval system
