Cynara cardunculus var. scolymus (artichoke): 112507514
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Entry
112507514 CDS
T05604
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112507514
04121 Ubiquitin system [BR:
ccav04121
]
112507514
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112507514
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112507514
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112507514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
Trm112p
zf-C3HC4_3
zf-RING_UBOX
Rad50_zn_hook
zf-HC5HC2H_2
UPF0547
zf-RING_5
zf-RING-like
zf-HC5HC2H
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
112507514
NCBI-ProteinID:
XP_024967905
LinkDB
All DBs
Position
LG 2:7324970..7326577
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AA seq
354 aa
AA seq
DB search
MSRTASYWCYRCTRIVRIIPQDAVVCPYCHGEFIEAVDSSTPESRRPFPDRSDLRLRRRN
AGDRSPFNPVIVLRGTDDENSGGGDRGFELYYDDGAGSGLQPLPPTMSEFLMGSGFDRLL
DQLSQIEINGLGRGEHPPASKAAVESMPAIEISDVQVSSELHCAVCKEAFVLGAEAREMP
CKHIYHPNCILPWLALRNSCPVCRQELPTDSTNSNNLQLSEQNEEESATVGLTIWRLPGG
GFAVGRFAGGRRAGGGERELPVVYTEMDGGFNNSTGTPRRIMWESRRGRTRGEGGFGRAF
RNMFSFFGRLRSSSNSNGSSMNRSRSVSSSVFSRMTSRRNRTWVLDEQNGLSRW
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaccgcctcctactggtgttacagatgtacacgcatcgtcagaataatcccc
caagacgccgttgtctgtccttactgccatggcgaattcattgaagccgtcgactcttca
acacccgaatctcgccgcccttttcctgaccgctcagatctgaggctccgccgccgaaac
gcaggggacaggtctccgtttaatccggttattgttcttcgaggtaccgatgatgaaaat
tcagggggtggagacagaggttttgagttgtactatgatgacggagcaggttccggattg
cagcctttgccgccgacgatgtcggagtttctgatggggtcagggtttgaccggttgctg
gatcagttatcgcagatcgagattaacggattaggtcgtggagaacatccaccggcgtct
aaagcggcggttgagtcgatgcctgcaatagagatctcggatgtacaagtcagcagcgaa
ttgcactgcgccgtctgcaaagaagcgttcgttctcggagctgaagctcgtgagatgcca
tgtaaacacatctaccatcccaattgcattctcccatggctagctcttcgaaactcttgc
cctgtttgccgacaagaacttccaacagattcaacaaattccaacaatctacaactctcg
gagcaaaacgaagaggaatcagcaacagttggattgacaatatggagattacctggcggt
ggattcgcagttggaaggtttgccgggggtagaagagccggcggtggagagagagagctt
ccggttgtctacacagaaatggacggtgggttcaataacagtacaggtacgccaaggagg
atcatgtgggaatcaagaaggggaaggactagaggagaaggtggattcggcagagctttt
cgcaacatgttctcattctttggcagattaaggtcgtcttcaaattctaatggttcatca
atgaacagaagtcggagtgtatccagttcagttttcagtagaatgacaagtaggcgaaat
agaacttgggttttagatgaacagaatggtttgtccagatggtag
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integrated database retrieval system
