Cynara cardunculus var. scolymus (artichoke): 112507518
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Entry
112507518 CDS
T05604
Name
(RefSeq) heat shock cognate protein 80-like
KO
K04079
molecular chaperone HtpG
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
ccav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112507518
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112507518
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112507518
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ccav03110
]
112507518
04131 Membrane trafficking [BR:
ccav04131
]
112507518
03051 Proteasome [BR:
ccav03051
]
112507518
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112507518
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112507518
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
112507518
Chaperones and folding catalysts [BR:
ccav03110
]
Heat shock proteins
HSP90
112507518
Membrane trafficking [BR:
ccav04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
112507518
Proteasome [BR:
ccav03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
112507518
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112507518
Exosome [BR:
ccav04147
]
Exosomal proteins
Proteins found in most exosomes
112507518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP90
HATPase_c_3
HATPase_c
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
112507518
NCBI-ProteinID:
XP_024967911
LinkDB
All DBs
Position
LG 2:68919613..68923299
Genome browser
AA seq
706 aa
AA seq
DB search
MAETETFAFQAEINQLLSLIINTFYSNKEIFLRELVSNASDALDKIRFESLTDKSKLDAQ
PELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ
FGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDEGEPLGRGTKIVLYLKED
QLEYLEERRLKDLIKKHSEFISYPISLWVEKTTEKEISDDEDXEEKKDEDEEKKDEEGKV
EEVDEEKEKEEKKKKKIKEVSHEWSLMNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEH
LNVKHFSVEGQLEFKAVLFVPKRAPFDLFDSKKKPNNIKLYVRRVFIMDNCEEIIPEYLS
FVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCIELFQEIAENKEDYVKFYEAFSK
NLKLGIHEDSTNKTKLAELLRYHSTKSGDEMTSLKDYVTRMKDGQNEIFYITGESKKAVE
NSPFLEKLKKKGYEVLYMVDAIDEYSVGQLKEFEGKKLVSATKEGLKLEETEDEKRKQES
LKEKFEGLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDAS
MAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNT
FGNRIHRMLKLGLSIDDDEAGEGDADIPALEDADIDAEGSKMEEVD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacagagacgtttgctttccaagctgagatcaaccagttgttgagtctaatt
atcaacactttctacagcaacaaggagatcttccttcgtgagcttgttagcaacgcctcc
gatgctctggacaagattcgttttgagagcttgactgataagagcaagctagatgctcaa
ccagagctgttcatccacatcattcccgataaggccaacaacacactgaccatcattgac
agtggaattggaatgactaaagcagatttggtgaacaatctaggtaccattgctcgttct
ggtaccaaagaattcatggaagccattgctgctggtgctgatgttagcatgattggacaa
tttggtgtcggtttctactcagcttatctggttgcagagaaagtcattgtcaccacaaaa
cacaacgatgatgaacagtatgtttgggagtcgcaggctggtgggtcattcacagtaacc
cgggatgaaggtgaaccccttggcaggggcactaaaattgtcctttatctcaaggaggac
cagctcgagtaccttgaggagcgcaggctcaaggatctgattaagaagcactctgaattc
atcagctatccaatctccctttgggtcgagaagacaaccgagaaggaaatatctgatgat
gaggatgamgaagagaagaaagatgaagacgaagagaagaaagacgaggaaggcaaagtt
gaggaggttgatgaagagaaggagaaggaagagaagaaaaagaagaagattaaagaagtg
tctcatgaatggtctttgatgaacaaacaaaaacccatctggatgaggaagccagaggag
atcaccaaggaagagtatgcagctttctacaaaagtctcaccaacgactgggaggaacac
ttgaaygtgaagcacttttckgtygaaggacagctggaattcaaggctgttcttttcgta
cccaagcgggccccctttgacctgtttgactcgaagaagaagcccaacaacatcaagctt
tatgtccgtcgtgtctttatcatggacaactgtgaagagatcatacccgagtacctcagt
ttcgttaagggtattgtggattcmgaggaycttccccttaacatttcaagagagatgttg
cagcagaacaagatyctgaaggttattcgcaagaacttggtgaagaaatgcatygaactt
ttccaggagattgcggagaacaaggaggattacgtcaagttctacgaagccttctccaag
aatctcaaactgggtatccacgaagattccacaaacaagaccaaactcgcggaattgctc
cgataycactccaccaagagtggagacgagatgactagcttgaaggactaygtgacgcga
atgaaagatggtcaaaacgaaatcttttacatcacgggtgagagcaagaaggccgtagag
aattccccattcctcgagaagttgaaaaagaagggatacgaagtcctctacatggtggac
gcaattgacgagtattctgtgggccagttgaaggaattcgaaggaaagaagctcgtttcc
gccactaaagaaggtctgaagcttgaagaaaccgaagacgagaagaggaagcaagaatct
ttgaaggagaaattcgagggtctatgcaaggtgatcaaggatgtgttgggcgacaaggtc
gagaaggtggtcgtatcggaccgcgtagtcgactctccgtgctgtctggtgacgggcgaa
tacggatggacggccaacatggagcgaatcatgaaagcgcaggctttacgtgacgcaagc
atggcgggatacatgtcgagcaaaaagacgatggaaataaacccagagaacgcaatcatg
gaggagttgaggaagagagcggatgcggacaagaacgataagtcggtgaaggatttggtg
ctgttgctgtttgagacagcactgttgacatctgggttcagtctggatgaaccaaacaca
tttggaaacaggattcataggatgttgaaactgggattgagcattgatgatgatgaagca
ggtgaaggcgatgctgatatacctgcccttgaagatgcagatattgatgctgaaggcagc
aagatggaggaagtcgactaa
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integrated database retrieval system
