KEGG   Cynara cardunculus var. scolymus (artichoke): 112507544
Entry
112507544         CDS       T05604                                 
Name
(RefSeq) replication protein A 14 kDa subunit B-like
  KO
K10740  replication factor A3
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03030  DNA replication
ccav03420  Nucleotide excision repair
ccav03430  Mismatch repair
ccav03440  Homologous recombination
ccav03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112507544
   03420 Nucleotide excision repair
    112507544
   03430 Mismatch repair
    112507544
   03440 Homologous recombination
    112507544
   03460 Fanconi anemia pathway
    112507544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccav03032]
    112507544
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112507544
DNA replication proteins [BR:ccav03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    112507544
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     112507544
   MMR (mismatch excision repair)
     112507544
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     112507544
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 112507544
NCBI-ProteinID: XP_024967949
LinkDB
Position
LG 2:6252526..6254940
AA seq 106 aa
MDTSNPAVLVNADLLRSYVGRRVRTVIQVIRPDAGGLIGRSTDEKQIVVKGHPPSPLTTF
IEVIGVADTTQSICAEIMTNFGDTFDTNNFNQLCQLANGDFRHLFI
NT seq 321 nt   +upstreamnt  +downstreamnt
atggatacatcaaacccagctgttcttgtgaatgctgacctgcttcgcagttacgtgggc
agaagagtacggacagtgattcaggtaattcggcctgatgctggtggtctcattgggaga
tcgacagatgaaaagcaaattgttgtaaagggtcatccgccgtctcctcttactactttc
attgaagtaattggtgttgctgatactacacaatccatctgtgcagagataatgaccaac
tttggcgatacatttgatacaaataacttcaaccaactttgccaacttgctaatggggac
tttaggcacttgtttatctaa

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