Cynara cardunculus var. scolymus (artichoke): 112507607
Help
Entry
112507607 CDS
T05604
Name
(RefSeq) auxin-responsive protein IAA12-like isoform X1
KO
K14484
auxin-responsive protein IAA
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112507607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
112507607
NCBI-ProteinID:
XP_024968024
LinkDB
All DBs
Position
LG 2:2347017..2350733
Genome browser
AA seq
255 aa
AA seq
DB search
MDGTLGLLGGIHGGADGGGGGDGGGVPSCGSILTNSKEDDTMNDQDMLAEVSSSYPVDDD
LELGLGLRIGGGGSNAIQEGSRILRPNSCSSSSSSSSVNITNSSIAGFKKSAIDSVSPPN
AASVVGWPPIRRAHRMPILANRIKSERKEYSSRAKSYLSVKVNMDGTLIGRKVDLNAHNS
YETLARTLENMFYGRLSNTETIGRSRLLSGTSEFVLTYEDKDGDCMLVGDVPWQMFVSSV
KRLRILRSPKSRNCI
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggatggtactcttggattactgggtggaattcacggcggcgccgacggtggtggtggt
ggtgatggtggaggagtgccgtcttgtgggtcgattttgactaattcaaaggaagatgac
acgatgaacgatcaggatatgttggctgaggtttcttcatcgtacccagttgatgatgat
cttgaattggggttagggttgagaattggtggtggtggttcgaatgcaatccaagaaggt
tctagaatcttgagacctaactcttgttcttcatcttcatcttcgtcatctgtgaatatc
accaattcatccattgctggatttaaaaaaagtgctattgattctgtttctcctcctaat
gctgccagtgtggttggatggcccccgataagaagagctcaccggatgccaatcttggct
aaccggatcaagtcagaacgcaaggaatatagctcaagagccaaaagttatctatccgta
aaggtgaatatggatggaacgctaatcggaagaaaagtcgatctcaatgctcacaactcc
tatgaaacgttagctcggaccttggagaacatgttctatggaagactgtcgaatacagaa
acaataggacgttcaagattgttgagtgggacatccgagtttgtgctgacgtatgaagac
aaagacggagactgtatgcttgtcggggatgttccttggcagatgtttgttagctctgtg
aaaagactaaggatccttagaagccccaaatcaagaaattgtatatga
DBGET
integrated database retrieval system
