Cynara cardunculus var. scolymus (artichoke): 112507688
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Entry
112507688 CDS
T05604
Name
(RefSeq) WD repeat-containing protein 11-like
KO
K24260
WD repeat-containing protein 11
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112507688
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccav03037
]
112507688
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Others
Others
112507688
Cilium and associated proteins [BR:
ccav03037
]
Other cilia and associated proteins
Other cilium assembly proteins
112507688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_1st
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
TPR_GEMI5
pP_pnuc_1
Motif
Other DBs
NCBI-GeneID:
112507688
NCBI-ProteinID:
XP_024968119
LinkDB
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Position
LG 2:12240172..12293373
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AA seq
1337 aa
AA seq
DB search
MTNSSDCMLPGPPSRNNGGSADIVSTGLLAYAAGSTVPILDTRSMQLVSVFPIPPPAANP
GTISTSSSTSMSPFVTSVRWCPTTLRLDLLSHDPTSSHSHLLLAAGDRQGRICLLDLRLK
SCPLLFLQTDLNSKLGIQDLCWIQARSDSWIVAALTGPSLLSLYNTSTGRCFFRYEAAPE
LFSCIKRDPFDSRHLCAIGLKGFLLSIKVQGDVSESDVVLEEFQIATDASELNKLEREGG
ISVGSAGTVTNSPATALFPTYSVKLAFSPHWRHILYVIFPRELVVFDMQYETALSRASLP
RGCGKFLDVLPDPSMELVFCAHLDGRLSAWRRKEGEQVHEMCMMEELVPSIGTSVPSPLV
LAVAISRSNSTLQNVAKHFSDALHTSSSDKDFDMDFDNPFDFRDESHIISRTHLLSVTDD
GKIWNWLLTSEGPTDNQKDMLDVANVTEVSKVPVLDPKSDTGASDDSLKDVAKQTDDVKI
GKGYPSASTVSQDKLTLKISLVGQLHLLSSTVTVLAVPSPSLIATLASGGNHPAVAVPLV
ALGTQRGSIDLIDVSANAVAASFSVHDNVVRGLRWLGNTRLVSFSYSQGSEKSGGYVNRL
VITCLRSGNNRTFRVLQKPERALIRALRVSSSGRYLLILFRDAPVEVWAMTKTPIMLRSL
ALPFTVLEWTLPTVPRPIHSATSKPSTVNSQDNTSVASDVSPTDSNGAQEDFTESFSFAL
VNGALGVFEVHGRRIRDFRPKWPDSSFVSSEGLVTAMAYRLPHVVMGDRLGNIRWWDVTT
GQSSSFNTHREGIRRIKFSPVVPGDRSLGRIAVLFNDNTFSVFDLDSQDPLANSLLLTQF
PGTLVLELDWLPVRTDKNDPLVLCIAGADSSFRLIQVNINDKKVGYGAQPGSVKERFRPM
PLCSPVLLPTAHALALRLILQYGVKPRWFNTCSTITDKGNSQISRTLSSDLRSYLIDVSP
IGDSVVPELLLKALEPYRREGCVLDDERVRQYANIITKGSAARFSFAAAIFGETSEACFW
LQLPRALKHLLNMLANKSLQKLPVKLPSASIDDSSLLSRMFTKGRSVAGSTNKKLVSDGQ
LRMMAFDQEELWENASERITWHERLEGEQAIQNRVHELVSVGNLDAAVNLLLSTPPESSF
FYPNALRAVALSSAVSRSLNELAVKVVAANMVRTDRSLSGTHLLCAVGRYQEACSQLQDA
GCWTDAATLAATHLRGTDYARVMQRWAGHVLDAEHNIWRALILYVAAGSLQDALAALREA
HQPDTAAMFIIACREVHAEFIEGLDPDDESSALIKDKLVVLHGLNPQSEDVIAVGELYTK
YQQQLVHLCMDSPPYSD
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattcgtcggactgcatgctaccgggaccgccctcccgcaacaacggcggatcc
gccgacatcgtatctaccggcctcctcgcctatgccgctggcagcaccgtccctatcctc
gatactcgctccatgcaactcgtctctgtatttcctatccctcctcctgctgctaacccc
ggcaccatcagtacttcttcctccacctcaatgtccccctttgtcacctccgtccgttgg
tgccctaccacgctccgtctagacctcctctcccatgaccctacttcatcgcattctcat
cttctccttgctgctggagaccgccaaggccgtatttgccttctcgaccttcgcctcaaa
tcatgccctttgctcttcctccaaacggatctcaattccaaactgggaatccaagacctt
tgctggatccaagcccgatctgactcgtggatcgtcgctgcactaacagggccatcactc
ctatctctctacaacacatccacaggacgttgcttcttcagatacgaggccgcgccggaa
ctcttctcatgcattaaacgtgacccctttgattctcgccatttgtgtgccataggttta
aaaggctttctcctgtcgatcaaagtccaaggcgacgtgtccgaatctgatgtcgtactg
gaagaatttcaaatcgctaccgatgcctctgaattgaataagctggagagagaaggcggt
atcagcgttggttctgccggtacagttactaattccccggcaactgcgttgtttcccact
tattcagtgaagctggcgttttcgcctcattggaggcacattttgtatgttatatttccg
agggaattagtcgtgtttgatatgcagtatgaaacggctctttctcgtgccagtttaccc
agagggtgcgggaagtttcttgacgtgttgccagacccaagcatggagctggttttttgt
gctcatcttgatgggcggctcagcgcttggcggagaaaggaaggagagcaggtgcacgag
atgtgtatgatggaagaattggtgccctcaattggcacatctgtcccttctcccttggtt
ctggcagttgcaatttctcgatcgaattccaccctccaaaatgttgccaagcatttttct
gatgcacttcatacttcatcttctgacaaggactttgatatggattttgataatcctttt
gattttcgtgatgaatcacatatcatttctagaacacatttgctatccgttactgatgat
ggaaaaatatggaattggcttctgacttctgaaggccctacagataatcagaaagatatg
ttagatgttgcaaatgttacagaagtcagtaaagtgccagttctagatccaaaatctgac
acgggagcttccgatgactccctgaaggatgtggctaaacaaacagatgatgtgaaaatt
ggcaagggttatccatcagcctccactgtgagccaggacaagcttacacttaagatcagc
cttgttggccagcttcatctgctttcttcaacagtgactgtgttggccgtgccatctcct
tctctgattgctactttggcaagtgggggaaaccatcctgctgtggctgttccactggtt
gctttgggaactcaaaggggttcaattgaccttattgatgtttctgcaaatgctgtagct
gcaagtttttctgtccatgataatgttgtaagagggttaaggtggcttggaaatactaga
cttgtttcgttctcgtacagtcagggaagtgagaagtctggaggctatgtcaataggctt
gtaattacatgccttcggagcggtaataatcgaacatttagggtcttacaaaagcctgag
cgtgcgctgataagagctctgcgggtatcgtcttctggaaggtatcttttgatcttgttt
cgtgatgcacctgtggaggtttgggcaatgacaaagactccaattatgcttaggtcttta
gctcttccgttcacagttttggagtggactcttcctactgttccacggccgattcatagt
gcaacatctaagccatctacagttaattcccaagataacacttctgtggcatctgatgtg
tcgcctacagactctaatggagctcaagaagactttacagagagtttttcatttgctcta
gtaaatggtgcacttggggtgtttgaggttcatggacgaaggatccgagatttcagacca
aagtggcctgattcatcatttgtttcttctgaaggactggttacagctatggcttatcgt
ctgccacatgtggtcatgggtgataggttagggaacattcggtggtgggatgtgacaact
gggcaatcttcctctttcaacactcacagggaaggcattagaagaatcaagttctcccct
gttgttcctggagatcgtagccttggacgtattgctgtattgtttaatgacaatacgttt
tctgtgtttgatcttgattcacaggacccattagccaattccctattactgactcagttt
ccaggaacccttgtgctggaacttgattggttacctgtccgaaccgataagaatgatcca
ttggtattgtgtatcgctggagctgatagtagctttcgccttattcaggttaacattaat
gacaaaaaagttggttatggagcgcagcctggatctgtgaaggagcgatttcggccaatg
ccgttatgttctcctgtattgcttcctacagcacatgccttggcattgcggctgatcttg
caatatggagtaaagcctaggtggtttaacacgtgtagtacaattacagataagggaaat
tcccaaatatcacgaactctatcatctgatcttcgtagttatttgattgatgtatcacct
attggtgactctgtagtgccagagttgcttcttaaagcattagagccctacagaagagaa
ggttgcgtacttgatgatgagagagtgcgtcaatatgctaatataatcactaaaggttct
gctgcgaggttttcttttgcagctgcaatatttggtgaaacctcagaggcttgcttttgg
ttgcaattgcctcgtgcactaaagcacttgttgaacatgttggctaacaagtctctccaa
aaactgcctgtaaaattgccgtctgcatcaattgatgattcatcgttactaagtaggatg
ttcacaaagggacggtcggtagcagggtcaacaaacaaaaaattagtgagtgacggccaa
cttaggatgatggcttttgaccaagaagagttgtgggaaaatgctagtgagcgtatcacc
tggcatgaaagattggagggtgaacaggctattcagaaccgtgtgcatgagcttgtgtcg
gttggtaacttggacgctgctgtcaatttactgctttctactcctccagagagctcattc
ttctatccaaatgctttgcgtgctgttgctctttcatctgcagtttcaagatctctaaat
gaacttgctgtaaaggtggttgcagcaaatatggtgaggactgacaggtcattgtcaggc
acacatctgctttgtgctgtagggagatatcaagaagcatgttcacagctgcaagatgca
gggtgttggacagatgctgcaaccttggcagcaacacatttaagaggaaccgattatgca
agggtaatgcaaagatgggcaggacatgtcctcgatgctgaacacaacatctggagggcc
ctgatattgtatgtagcagctggttcgttgcaagatgcattggcagcactgcgtgaagct
caccaaccagatacagcagctatgttcatcattgcgtgccgggaagttcatgctgaattt
atagagggtttagatcctgatgacgagtcgtcagccttgatcaaggataagttggttgtt
ttgcatggattgaacccacaaagtgaagacgttatcgctgttggggaattatacacaaag
taccaacagcaactcgtccatctctgcatggactctcccccctattctgactaa
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