Cynara cardunculus var. scolymus (artichoke): 112507719
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Entry
112507719 CDS
T05604
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112507719
03036 Chromosome and associated proteins [BR:
ccav03036
]
112507719
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112507719
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112507719
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112507719
microRNA pathway
RISC loading complex
112507719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
112507719
NCBI-ProteinID:
XP_024968172
LinkDB
All DBs
Position
LG 1:complement(45514933..45523175)
Genome browser
AA seq
1109 aa
AA seq
DB search
MVRKKRSDASGGGEGSESQEAGSGRGSGAQRPPAQQQQQQQQQGGYQGRGQAGYQGRGQA
GYQGGQGAYQGGQGAYQGGGQSAYQGGQPQGGRGWVQRGGYGGGGGGPQRGGASQQYYGG
PPDQPQQGQQQKPPRGTAPPQRRGGGDVRGGSGPTYAGGSSRPSVPELYQATQAPQQPVV
TLQPMPHGKPAEVLHAESSSSSSTNQMVDESMTQFQQLTFQEEEPIQGAPASSKSMRFPL
RPGKGSSGTRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMEQLVKLYRDSHL
GKRLPAYDGRKSLYTAGPLPFVSKEFKIILVDEDDGTGGARRERDFKVVIKLASRADLHH
LGMFLQGKQADAPQEALQVLDIVLRELPTNRYCPVGRSFYSPDLGRRQSLGEGLESWRGF
YQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSARPLSDADRVKIKKALRGV
KVEVTHRGNMRRKYRISGLTSQATRELNFPVDDRGTMKSVVEYFRETYGFTIQHIQWPCL
QVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQEREMDILKTVSHNAY
GQDPYAKEFGIKISQKLASVEARILPPPWLKYHDTGRERDCLPQVGQWNMMNKKMVNGGT
VTSWICINFARNVQDNIARAFCQELAQMCNTSGMAFNPEPVLPALSGRPDQVERVLKARF
HDAMTKLQPHKKELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVFRMSKQYL
ANVALKINVKVGGRNTVLADALSRRIPNVSDVPTIIFGADVTHPHPGEDSSPSIAAVVAS
QDWPEITKYAGLVCAQAHRQELIQDLFKEWQDPNRGKVSGGMIKELLISFRRATGQKPQR
IIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANDHRDR
NSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADALQS
LTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMISGAAGRGMGMGMG
GRSTRVPANAAVRPLPALKENVKRVMFYC
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaagtgatgcttctggtggaggggagggctctgagtctcaggag
gctggttcgggacgaggcagtggtgcccaaaggccaccagcacaacaacagcaacaacag
cagcagcaaggtggttatcagggaagaggacaagctggttatcaaggacgagggcaggca
ggttatcaaggaggacaaggtgcttaccaaggtggacaaggtgcttaccaaggtggagga
caaagtgcttatcaaggtggacagcctcaaggaggaagaggttgggttcagaggggtggt
tatggtggtggcggtggaggcccacagcgcggtggcgcttctcagcagtattatggggga
cctcctgatcaacctcaacaaggtcagcagcagaagcctccaagaggaactgcaccacct
cagcgccgtggaggaggtgatgttcgtggtggatctggacctacatatgctggtggatct
tctaggccatcagttcccgagctgtaccaagcaacacaggctcctcagcagcctgtggtc
acactgcagcctatgccacatgggaaaccagctgaagtgcttcatgcagagtcgtcttct
agttcatctaccaaccagatggtagatgagtcaatgactcagtttcagcagctcactttt
caggaagaagagcccattcagggcgcacctgcttccagcaaatccatgaggtttcctttg
cgtccaggaaagggtagctcaggaactaggtgcattgtgaaggcaaaccacttttttgct
gaattgcctgacaaggatttacaccagtatgatgtgacaatcacgcctgaggtgacctct
cgtggtgtgaaccgtgctgtaatggaacaattggtgaaattgtacagagattctcatctt
gggaagaggcttcctgcatatgatggaagaaagagtctgtatacagctggtcctctccct
tttgtttcaaaggagtttaaaattattcttgttgatgaagatgatggaacaggcggtgct
aggagagagagagattttaaagttgtgattaaattggcttcacgtgcggatttgcatcac
ctgggaatgtttttgcaggggaagcaagcagatgcgccacaagaagcacttcaggttctg
gatattgttctacgagagttgcctactaatcgatattgtcctgtgggacggtcattttat
tctcctgatctgggtcgtagacaatcactgggtgaggggttagaaagttggcgtggtttc
tatcagagcatacgacctacacagatggggctttctctaaatattgatatgtcttcaact
gctttcatcgagccactgcctgtgattgactttgtcacacagcttctgaatagagatgtt
tcagcaagaccattatctgatgctgaccgggtgaagatcaaaaaggcattgagaggagtt
aaggttgaagttactcaccgtggaaatatgcgacggaagtatcgcatatctggtttaaca
tctcaggcaacacgagagttgaactttccagttgatgacagaggcacaatgaaatctgta
gttgaatacttccgggagacctacggattcaccatccaacatatacaatggccgtgcctg
caagttggaaatactcaaagaccaaattatttgcctatggaggtctgtaagatcgtggag
gggcagaggtattcaaagaggctgaatgagcgacaaattacagcccttctcaaagttaca
tgtcaacgccctcaggaaagagagatggatatcttgaagacagtcagtcacaatgcttat
ggtcaggatccttatgccaaggagtttgggataaaaattagccagaagctagcctcggtt
gaagctcgaatattgcctcctccctggcttaaataccatgatacaggccgtgaaagggac
tgtctgcctcaagtgggccaatggaatatgatgaataagaaaatggtgaatggtggaaca
gtcactagctggatctgcataaattttgcacgcaatgtacaagacaacattgctcgtgct
ttttgtcaagagcttgctcaaatgtgcaatacttctggcatggcatttaatcctgagcct
gtgcttccggcactcagtggtcgtcctgatcaggttgagagagtcttgaaagctcgtttc
catgatgccatgacaaaacttcagccccacaaaaaggaacttgatttgctaattgtcatt
ctgccagacaacaatggctcactttatggtgacctgaaaaggatatgtgagactgatctc
ggcattgtttctcagtgctgtctgacgaagcatgtcttcaggatgagtaagcagtatctt
gcaaatgtggcgttaaagatcaatgttaaggttggaggaaggaacacagttcttgctgat
gcattatcaaggcgaataccgaatgttagtgatgttccaacgatcatatttggggctgat
gtcacacatccacacccaggagaagattctagcccgtcaattgcagctgttgtggcttcc
caagattggcctgagattacgaagtatgcgggattggtttgtgcccaagcccatcgtcaa
gaactcatccaagatctatttaaggaatggcaggatcccaatagaggcaaagtatctggt
ggcatgatcaaggaactcctcatatcattccgtagagcaactgggcaaaaaccacagcgt
atcatcttctacagggatggtgtcagtgaagggcagttttatcaagttctactttatgag
cttgatgcaatccgcaaggcttgtgcatcattggagccgaactatcagcctccagtgaca
tttgttgtggttcagaaacgtcatcacaccagactatttgcaaacgatcaccgtgatcgt
aattctatagacaggagtggaaatatactgccaggcactgttgtcgattctaagatctgt
catcctacggaatttgacttttatttgtgcagccatgctggcattcaggggacaagccgt
cctgctcactatcatgtgttgtgggatgagaacaagtttacagccgatgccctgcaatcc
ctcacaaacaacctctgctacacatatgcaaggtgcacacgctctgtatccattgtgcca
ccggcatattatgctcatctggctgcttttagagcacggttttacatggaacctgataca
tctgacagtgggtcaatgattagcggcgctgccggtcgcggaatgggaatgggcatgggt
ggtagaagcacacgtgtgccagcaaatgcagcggttagacctctacctgccctcaaggag
aatgtgaaacgggttatgttctattgctag
DBGET
integrated database retrieval system
