Cynara cardunculus var. scolymus (artichoke): 112507733
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Entry
112507733 CDS
T05604
Name
(RefSeq) formin-like protein 20
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112507733
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112507733
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112507733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_10
zf-rbx1
Prok-RING_4
TRAF3_RING
Zn_ribbon_6
Sina_RING
Rtf2
zf-ANAPC11
zf-Nse
Motif
Other DBs
NCBI-GeneID:
112507733
NCBI-ProteinID:
XP_024968188
LinkDB
All DBs
Position
LG 2:3112378..3117092
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AA seq
231 aa
AA seq
DB search
MSRQGQTIMYARGGRRRKVLDVDLNDPPPADHNEPIPLTINVVEAPPPPVQQVHSRIVPV
SLVRQDFQPLDPTPPVPIDVENLDDDVIISTLTDFEEARNSSRRLQARTSVVNVESAGPS
LVLGSRRRNPRKRSNPQHLVINLEGSSCSMKQPVAAPPPPPPPPPPPPPPPPTFTCPVCM
GPLVEEVTTKCGHIFCKGCIKTAIAAVPKCPTCRRKVTNRDIIRIYLPAAN
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacaggggcaaactataatgtatgcaaggggtggtaggcgaaggaaggtgctt
gacgtggatctcaacgatcctccaccagctgatcataatgagccgatcccacttacaatt
aatgtggttgaggctcctccgcctccggttcagcaagtccattcgcgaattgttcctgtg
tctctggtcaggcaagattttcagccactggatcctacgccacctgtaccaatcgacgtt
gagaacttggatgatgatgttatcatatcaaccctcacagatttcgaagaagctaggaac
agttctcgaagacttcaagcaaggacttcagtggttaatgtggaatcagccgggccttct
cttgttcttggttctcgccggcgcaacccaaggaaaagatctaacccgcagcatctagtc
atcaatttggaaggaagtagctgttccatgaaacagcctgtggcggcaccaccaccgccg
ccaccaccaccaccaccaccacctccacctccacctaccttcacctgtccagtttgcatg
ggaccattagttgaggaggtgaccacaaaatgtggtcacattttctgcaaaggttgcatc
aaaactgctattgctgctgtgcccaaatgtccaacctgtcgccgcaaagtcaccaatagg
gacatcatcaggatctaccttcctgccgccaattga
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