Cynara cardunculus var. scolymus (artichoke): 112507737
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Entry
112507737 CDS
T05604
Name
(RefSeq) 26S proteasome regulatory subunit 6A homolog
KO
K03065
26S proteasome regulatory subunit T5
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112507737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ccav03051
]
112507737
Proteasome [BR:
ccav03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112507737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
nSTAND3
AAA_5
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
AAA_14
AAA_7
Mg_chelatase
IstB_IS21
PhoH
AAA_24
TIP49
AAA_33
ATPase
Parvo_NS1
RNA_helicase
AAA_11
AAA_28
Sigma54_activat
AAA_25
Motif
Other DBs
NCBI-GeneID:
112507737
NCBI-ProteinID:
XP_024968194
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Position
LG 2:complement(9608933..9614064)
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AA seq
423 aa
AA seq
DB search
MATPMAEDTSFEDDQLAAMSTEDIQRASRLLDNEIRILKEELQRTNLELDSFKEKIKENQ
EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKSSLN
YYA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgatggcagaagacacgagctttgaagatgatcaactggcagccatgtca
accgaagacatccagagggcgtctcgccttcttgataacgagattcgaatcctcaaggaa
gaattgcagagaaccaatcttgaattggattcgtttaaggaaaagatcaaggagaatcag
gagaagatcaaacttaacaaacagcttccttacttggttggaaatattgttgagattttg
gaaatgaacccagaggatgaagctgaggaagatggtgcaaatatcgatcttgactcgcaa
aggaagggtaaatgtgttgtgctaaaaacatctactcgtcagactattttcttgcctgtc
gttggcctcgtggacccggataagctgaagcctggtgatttggtgggtgtgaataaggac
agttacttgatattggatacattgccatctgagtatgattcccgagtcaaggccatggag
gttgatgaaaaaccaactgaagattacaatgacattggaggccttgaaaaacagatacaa
gagctagttgaggccatagttttgccgatgacgcataaagagcggttccaaaaattaggg
atacgtccaccaaaaggagtgctcttgtatgggcctccggggactgggaagacattaatg
gcacgtgcatgtgctgcgcaaacaaatgccacttttttgaagctagcaggaccccagctt
gttcagatgtttattggtgatggtgcaaaacttgttcgtgatgcatttcaactggccaaa
gagaaatcaccttgcatcatttttattgatgagattgatgctattggtacaaaacggttt
gatagtgaagttagcggagatagggaagtgcagcgaactatgttggaactacttaatcag
ttggatggttttagcagcgatgagcggataaaggtgatagcagcaacaaatcgggctgat
attttggaccctgctcttatgcgttctggtcggttggatcgtaagattgagtttccacat
cctactgaagaagcaagggcgcggatcttgcagatacactcccggaagatgaatgttcac
ccagatgtcaactttgaagagctggctcggtctacagatgattttaacggggcacaactg
aaagccgtttgtgtggaagcaggcatgcttgctcttcgacgtgatgcaacagaggtaaac
cacgaagactttaacgaagggatcatccaagttcaggctaagaagaaatcaagcttaaat
tactatgcttag
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