Cynara cardunculus var. scolymus (artichoke): 112507775
Help
Entry
112507775 CDS
T05604
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112507775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
112507775
NCBI-ProteinID:
XP_024968253
LinkDB
All DBs
Position
LG 2:complement(62995033..62997030)
Genome browser
AA seq
593 aa
AA seq
DB search
MATDDRRSPVDLLAFEKDAKALEFIEKMTSSADTVQANVLAAILSRNAKTEYLKLYNLDG
ATDQETFKSKIPMVTYEDLQPLIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPTI
REDMDRRQLLYSLLMPVMNLYMPGLDKGKGLYFLFVKSETQTPGGLLARPVLTSYYKSDH
FKSRPYDPYNVYTSPIEAILCPDSFQSMYSQMLCGLYDRKNVLRIGAIFASGLLRAIRFL
QLNWKELCNDIRTGTLNYKISDPDIQRCMTRILRCDPDLANIIESECSNQNWERIVTRIW
PNVKYLEVIVTGAMAQYIPTLNYYSGGLPKVCTMYASSECYFGLNLNPLHEPSEVSYTIM
PNMAYFEFLPHDPHSERTSDSLVDLVNVEIGKEYELVITTYAGLYRYRVGDILRVAGFHN
SAPRFHFVRRKDVLLSIDSDKTNESELQSAIENASKLLNEFNTTVVEYTSYADTRTIPGH
YVIYWELLVKDSRNYPKGEVLEKCCLAMEESLNSVYRQGRVECNSIGALELRVVKNGTFE
EVMDYAVSRGASINQYKVPRCVSFTPIVELLDSRVVASYFSRGLPHWTSERRR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgatgatcggagatctcctgtggatttgttggcgttcgaaaaagatgcgaag
gcgcttgagttcatagagaagatgacgagcagcgctgacaccgttcaggcgaatgttttg
gcggcgatactcagccggaacgctaagactgagtatctcaagctttacaatctcgacgga
gccaccgatcaagaaactttcaagtcgaagattccgatggtcacttatgaggatcttcaa
cctcttattcaacgcatcgccaatggtgatcgttctcccattctatcagctcatccgatt
tctgaatttctcactagttccggtacttctgccggtgaacgaaagctcatgccgacgatt
cgtgaagatatggatcgacgtcaactgctttacagtcttctgatgcctgtaatgaatctg
tacatgccaggtttggacaagggaaaagggctatacttccttttcgtgaaatccgaaacg
cagactccgggtggactactggcccgacccgtactcacaagctactacaaaagtgatcat
ttcaagtcccgaccatatgacccgtataacgtctacaccagcccaatagaagccattctc
tgcccagactccttccagagcatgtattctcagatgctttgcggtctttatgaccgcaaa
aacgtactccggattggagccatttttgcctctggtctcctccgagccattcgattcctt
caacttaattggaaggaactctgcaatgatatccgaaccggtactcttaattataagatt
tcagatccggatattcaaaggtgcatgacccggatacttagatgtgacccggatcttgca
aacatcatcgaatctgaatgctcaaaccagaattgggaaagaattgtaacccgaatctgg
cctaatgtcaaatatctagaagtgatcgtgaccggtgcaatggctcaatacattccaaca
ctcaattattacagcggcggcctaccgaaggtttgcaccatgtacgcttcttccgagtgt
tatttcggcctcaacctcaacccgttgcacgaaccatccgaagtctcgtacaccatcatg
ccaaacatggcctacttcgagttccttccccacgatccacattcagagcggaccagtgat
tcattggtcgacctagtgaatgtggagatcgggaaggaatacgagcttgtgatcaccacc
tacgcaggtctctacagataccgcgtgggtgacatcctccgtgtcgctgggttccacaac
tccgccccacggttccatttcgtgagacgaaaagacgtcctgctgagcatcgattcggac
aaaaccaacgaatccgaactccaatctgccattgaaaatgcatcgaaattattgaacgag
ttcaacacgaccgtggtcgagtacacaagctatgcggatacccgaaccatcccgggtcat
tatgtgatttactgggagttattggtgaaggattcaaggaattatccaaaaggtgaggtg
ctggagaagtgttgcttggcaatggaggagtctctgaattcggtttacagacagggtcgg
gttgagtgcaattcgatcggggcgttggagctccgagtggtgaaaaatggtacgtttgaa
gaggtgatggattatgcagtatcaagaggggcgtcgatcaaccagtataaagtgccaagg
tgcgtaagtttcacaccaatagtggagttgctggactccagggtggtggcgtcgtatttc
agtcggggtttgccgcactggacttcggaacgccgccggtga
DBGET
integrated database retrieval system
