Cynara cardunculus var. scolymus (artichoke): 112507792
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Entry
112507792 CDS
T05604
Name
(RefSeq) probable histone H2A variant 3
KO
K11251
histone H2A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112507792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112507792
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112507792
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
112507792
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112507792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone
Histone_H2A_C
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
112507792
NCBI-ProteinID:
XP_024968272
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Position
LG 2:complement(1596989..1601902)
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AA seq
139 aa
AA seq
DB search
MAGKGGKGLLAGKTTAAAAAAANKDKDKKRPISRSSRAGLQFPVGRIHRHLKTRTSANGR
VGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIA
GGGVIPHIHKSLINKTTKE
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaaaggtgggaagggcctattggctggaaaaacaaccgcagctgccgctgct
gcagctaataaggacaaagataagaagaggccgatttcccggtcttctcgagccggtctc
cagtttccagtcggaagaatccatcggcatctgaaaacgaggacctccgccaacggccgg
gtcggagccacggccgctgtttactcagccgcaattctcgagtacctaaccgcagaggtg
ctcgagttggccggaaacgctagcaaagatttgaaggtgaagaggatcaccccacggcac
ctgcaacttgcgattcgtggtgacgaggagctcgacacgctgatcaaagggacgatcgcc
ggaggcggtgtcattcctcacatccacaagtcactcatcaacaaaaccacaaaggaatag
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