Cynara cardunculus var. scolymus (artichoke): 112507814
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Entry
112507814 CDS
T05604
Name
(RefSeq) protein indeterminate-domain 9-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112507814
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112507814
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-BED
zf-C2H2_6
DNA_pol_viral_C
Motif
Other DBs
NCBI-GeneID:
112507814
NCBI-ProteinID:
XP_024968304
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Position
LG 1:10031721..10033986
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AA seq
464 aa
AA seq
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MMSGDGFSSPPPSLTALVHDPVTKPNPNSANSAKRKRSLPGTPDPDAEVIALSPKSLMAT
NRFMCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKQEVVRKKVYICPEKSCVHHDPSRA
LGDLTGVKKHFSRKHGEKKWKCEKCSKKYAVLSDWKAHSKICGTREYKCDCGTLFSRKDS
FVTHRAFCDAISEEHSGMASFPMVQTTTNLNFQRDLMMMNGGDRIGNPRLPAIFCGGGEL
AKSPDGNEMKPRLPIWLHHHANNPLDNSTTNSLFLGSSSSNDNNGGILSSEMVQWLSRSQ
EAVQTFTELPQGLSLEEEENNKEEMQLNSLYNYGGCPNYPPPPPPHLSATALLQKASQIG
STRSTNSGGFGFMSTTKLSELTSLNQTRNNGGSQAENLRGEMMNGDGLTMMMMAGLNKKT
GEGNLTRDFLGVEGYERRAFSLQQELIKFTCSNNDSSIGFSGSQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggtgatgggttttcatcacctcctccttccctcacagctttggtccatgac
cctgtaacaaaacctaaccctaattctgcgaattcagctaagcgaaaacgtagtctgcct
ggcacaccagatccagatgcagaagtgatagcgttatcaccaaagtctctgatggcgacg
aaccgattcatgtgtgagatatgcaacaagggttttcagagagatcagaatttacagctt
catagaagaggacacaatctgccatggaagcttaagcaaagaaataaacaagaagttgtg
aggaagaaggtttacatatgcccagaaaaaagctgtgttcatcatgacccttctcgagct
ctcggagatctcaccggagttaagaagcattttagcaggaaacatggcgaaaagaaatgg
aagtgtgagaagtgttcgaagaagtatgcagttctgtcggattggaaggctcatagcaag
atttgtggtaccagagagtacaagtgtgattgcggaacactcttttccaggaaagatagc
tttgtaacgcatagagcattttgtgatgcaatttcggaagaacactcaggaatggcgtcg
tttccgatggttcaaaccaccacgaatctcaatttccaaagagatttgatgatgatgaac
ggcggtgataggattgggaacccaaggttaccggcgattttttgtggtggtggcgagtta
gcaaaaagtccagacggaaacgagatgaaacccagattaccaatttggctgcaccaccat
gccaataatccactcgacaactctacaaccaattcgttgtttttggggtcatcaagctcc
aacgacaacaatggcggcatattgtcgtcagaaatggtgcagtggctgagtagaagccaa
gaagcagttcaaacttttacagaactgccacaaggcttatccttagaagaggaagagaac
aacaaagaggaaatgcagttgaattcgttgtataattatggtggttgtcctaattacccg
ccaccacctccgccacatttatcggccaccgcccttttacagaaggcgtctcaaattgga
tccacgagaagtaccaactccggcgggtttgggtttatgagcactactaagctctccgag
cttacttctttgaaccaaaccagaaacaatggcggctcccaagcggagaacttgagaggt
gaaatgatgaacggcgatggattgacgatgatgatgatggcgggattgaataagaaaacc
ggcgaggggaatttaaccagagattttcttggcgtggaagggtacgagagacgagcattt
agtttgcaacaagagctgatcaagttcacttgttcgaacaacgattccagcataggtttc
agtggcagtcaatga
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