Cynara cardunculus var. scolymus (artichoke): 112507817
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Entry
112507817 CDS
T05604
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112507817
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112507817
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
90S particles
Helicases
112507817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
112507817
NCBI-ProteinID:
XP_024968302
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All DBs
Position
LG 2:complement(69312472..69318968)
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AA seq
738 aa
AA seq
DB search
MKKPKSKQLRIQSRTSEVQEIELLEKWIEFGKPESGSNPLSLPPLPAKSPVGRIDESTYS
QFAGCTKFQQLPLSKNTKDGVRQAGYRNMTNIQRASLPHALCGRDILGAAKTGSGKTLAF
IIPVLEKLYKARWGLEDGLGSIILSPTRELADQLFSVLKSVGKHHGFSAGLLIGGNEYDE
EKDHVNRMNILICTPGRLLKHMDATPNFDCSQLQVLVLDEADRILDAGFKKEVNAIISQL
PKYRQTLLFSATQTKSVKDLARLSLKDPEYIAVDEEAIAATPSRLQQKVMLVPLDQKLDM
LWSFIKAHLNSRILVFLSSCKQVRFVYEAFKKLRPGIPLKCLHGRMKQIKRTFILQQFVE
QRSVLFSTDVSSRGLDFNKGVDWVVQVDCPDDVAGYIHRVGRTARYDSAGRSVLFLLPSE
MKMLERLQEKKIPVQFDKANTKRLQSVSGLLAALLAKYTDLQPLAQRAFKTYVKSIYKQK
DKEVFDVTKLPIDDFSASLGLPMTPQLRYLDRKNVDKKMPGESNLVPEVPVKKDSVKLLR
QKPTNNLFEESEEEEEEELDLLKSKETADGEEGKAIAADHLLPTTRVLKKKKLKINVHRP
VGTRVVFDEEGNTLPPLATLADMSATDSALLDKDKVMKRYAEMREDMKTRDQEDKLLDRQ
RRKEKRIKEKKKQKRARDEELEDEDEDEDTRNVKKSKVYFNSDSEEEEGRSKVALKTDAI
SLAEQEELALKLLSCMHS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaccaaaatccaagcagttacggatacagagccgcacatcggaggttcaagaa
atcgaattattggaaaaatggatagagtttgggaaacccgaatctggttccaacccatta
tccctcccgccgctgcctgctaaatctccggtcggccgtatcgatgagagtacctactct
cagttcgccgggtgcacgaaattccagcaactcccattgtcaaagaatacaaaagatgga
gtgcgtcaagctgggtatagaaacatgactaatattcagagggcttcgctgcctcatgcg
ctctgtggccgtgatatactcggcgcggccaaaactgggtccggcaaaaccctagcgttt
ataattcctgttctggagaagttatacaaagcaagatgggggttggaggatggactaggt
agcattatcctgtctccaactagggaattggcagatcagctttttagtgtattaaaatca
gttggcaagcaccatggatttagtgccggtctcttaattggtggtaatgaatatgatgaa
gagaaggatcatgtgaatcggatgaacatattgatctgtactcctggccggcttttgaag
cacatggacgcaactccgaattttgattgttcacagctacaggttttggtacttgatgaa
gcagatcgcattcttgatgctggttttaagaaggaagtaaatgctataatttcgcaactt
ccaaaatatagacagactctacttttctctgcaacacaaacaaaatcagttaaggatctt
gcacgactcagtttgaaggaccctgaatatattgctgtcgatgaggaggctatagctgct
actccgagtcgtctgcagcagaaagtcatgcttgttccccttgatcaaaagctagatatg
ctatggagcttcattaaggcccatctaaattcaaggattcttgtgtttctttccagctgc
aagcaggtaaggtttgtatacgaagcattcaagaagctacgtccgggtatccctttgaag
tgcttgcatggaaggatgaaacaaataaaacggactttcatattgcaacagtttgttgag
caacggtcagttctcttttcaaccgatgtgtcctcaagaggccttgatttcaacaaaggg
gttgattgggttgttcaggtggattgccctgatgatgttgcaggttacatacacagagtg
ggtcgcactgcccgctatgattctgcggggaggtccgtcttatttctcttgccttcagag
atgaagatgctcgagagattgcaagagaaaaagatacctgttcaatttgacaaggcaaac
acaaaacggttgcaatctgtttctggtttgttggctgctctgctagcaaagtacacagat
ttgcagcctttggctcaaagggcttttaaaacatacgtgaaatcaatatacaaacagaaa
gataaagaagtttttgatgtgacgaagcttccgattgatgacttctcggcatcattgggt
ctgccgatgaccccacagctccgttaccttgatcgtaaaaatgtagacaaaaagatgccc
ggagagtccaatttggtaccggaagttcctgtaaagaaagattcggtgaagcttttgaga
caaaagccaacaaacaacttatttgaggaatctgaagaggaagaggaagaggaacttgat
cttcttaaaagcaaggaaactgcagatggtgaggaagggaaagcaattgcagctgaccat
ttgttgcctacaactagagttcttaagaagaagaagctgaagattaatgtccatagacca
gtggggacacgagttgtatttgatgaggaagggaacacactgccaccacttgcaacatta
gctgacatgagtgccacagactctgctctgctcgataaagataaagtaatgaagaggtat
gccgaaatgagagaagatatgaaaacacgcgaccaggaggacaagctcctggatcgtcaa
cggcgcaaagaaaagagaataaaggagaagaagaaacagaagagggcaagagatgaagaa
ttagaggatgaggatgaggatgaagacacgaggaatgtgaaaaaatcgaaggtgtacttc
aatagcgatagtgaggaggaggagggaagatcgaaggttgcattgaagacggatgcaatc
tctttggccgagcaagaggagcttgccctcaagctgttgagttgtatgcactcgtga
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